| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0086 |
|---|
| Symbol | |
|---|
| ID | 4847221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 79554 |
|---|
| End bp | 80522 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640114757 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001046003 |
|---|
| Protein GI | 126178038 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG AACGGGTCTT CACCGTGGCC CAAAAAGAGT TCACCGACCA GATCACGGGC
TGGCGATTCC TGGTGATCCT CGCCCTCTTC CTCGCCATCG CTCTGGTGGG AACCTACAGC
GGGGTCGTGA GCTACGAGAG AGAACTGGAT AGATACTCCC AGCAACTGGC CGCGATGGAT
AACCAGAATG ACGGATCGGC CGGGATGATG CCCGCAAAAC CCCCGGTCGA GGGCGTTTAC
TCCTCAATGT TCCTCACGCT GGTCTCCTAC GGGGGCCTCC TTGCCATCGC CGTCGGGTCC
GGCCTGGTCT CCGGGGAGAA GGAGTCCCGG TCGCTCAAAA GCCTGCTCTC CCATCCGGTC
TACCGCGACG AGATCATCAA CGGCAAGGCG CTCGGGGGCG TCGCGCTGCT TGCCCTCGTC
GTCGGGAGTG TGCTCGCTAT CTCCACCGCG CTCCTCCTCG TCTTCTCGAT CGTGCCCGCC
CCCGGCGATC TCTGGATGAT CCTGACCTAT GCCGGCGTTA TCCTCCTCTT CCTCATCACG
TTCTTCTCCA TCGCGCTCGC CCTCTCCACC CTCTGCCGGG AGAGCGGCAG CGCCCTGCTC
CTCTCGGTGG TCGTCTTCAT CCTCCTCGTC TTCCTGGCTC CCTACGCCAC CACGCATATC
GGGATGGCGC TCATGACGGA GGAGCCCGAT CCGGCGGCAT ACGGCGGGGA TATCTCGTCG
GAAGAATTCC AGGCAGCGAT CACGGCGTAT TACGGTCAGT TTGACCTGAT CCAGAGCATC
GGAAACCTCG CATCACCGCA GATGGCGACC AACGCCCTCA TCCAGGGGAT CGGCAACGCC
CCGACATCGG GGGCGACCCT TGAGGATACG CTCGGCAAGA TATGGTCGAG CGTTGTGGCG
CTGATCCTCT ACCCCACCGT CTTCTTCGCC GTCGCGTACA CGCGGTTCAT GCGGATGGAC
ATCCGGTGA
|
|---|
| Protein sequence | MTAERVFTVA QKEFTDQITG WRFLVILALF LAIALVGTYS GVVSYERELD RYSQQLAAMD
NQNDGSAGMM PAKPPVEGVY SSMFLTLVSY GGLLAIAVGS GLVSGEKESR SLKSLLSHPV
YRDEIINGKA LGGVALLALV VGSVLAISTA LLLVFSIVPA PGDLWMILTY AGVILLFLIT
FFSIALALST LCRESGSALL LSVVVFILLV FLAPYATTHI GMALMTEEPD PAAYGGDISS
EEFQAAITAY YGQFDLIQSI GNLASPQMAT NALIQGIGNA PTSGATLEDT LGKIWSSVVA
LILYPTVFFA VAYTRFMRMD IR
|
|---|
| |