| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0076 |
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| Symbol | |
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| ID | 4846877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 70768 |
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| End bp | 71940 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640114747 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001045993 |
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| Protein GI | 126178028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG GACGATACGG AGTATACGGC GGGCAGTACG TGCCCGAGAC CCTGATGAGC
GCGCTGATCG AGCTGGAGGA GACCTATGGG CGAATCCGCG AGGACCCGGG ATTCTCCCGC
CGGCTCTCCT GGTACCTCCG CGAGTACGCC GGGCGGGAGA CGCCGCTCAC CTACTGCGGG
AACCTCTCCC GTGACCTCGG CTGCCGGGTT TACCTGAAAC GTGAGGATCT CCTCCACGGC
GGTGCGCACA AGCTGAACAA CACCCTCGGC CAGGCACTCA TGGCGAAGTT CATGGGCAAG
CGCCGGCTGA TCGCCGAGAC GGGCGCCGGG CAGCACGGCG TTGCGACGGC GATCGCGGGC
GCGGCGCTCG GTCTGCCCGT CGAGGTCTAC ATGGGCGAGG TGGATACCCG GCGCCAGGCA
TTGAATGTCT TTCGGATGGA ACTCCTCGGC GCCCGGGTCG TCCCGGTCGC CTCCGGGACG
CGGACATTGA AGGACGCCAT CAACGCGGCG ATGCGCGACT GGGTGGCGAA CCTCCGGGAG
ACCCACTACC TGCTCGGCTC CTGCGTCGGC CCGCACCCCT TCCCCCGGAT CGTCCGCGAC
TTTCAGTCGG TGATCGGCGA GGAGACGAGA AGGCAGATCC TTGAACGGGA AGGGCGGCTC
CCCGACACCG TCGTCGCCTG CGTCGGCGGG GGTTCGAACG CGATCGGCAT CTTCTACCCG
TTCGTCGGCG ACGACGTTGC ACTGGTCGGC GTGGAAGCGG GAGGCGAGGG GCTCGATTCC
GGCCGTCACG GCGCTTCGCT CTCTGCCGGT TCGGTCGGGG TCTTTCAGGG GGCGCTCTCC
TACCTTCTCC AGGACGGCGA CGGCCAGGCG CTCGAGACGC ACTCCGTCGC CGCGGGCCTC
GACCACCCCT CGGTCGGGCC GGAGCACGCC ATGCTGAAGG ACTCCGGGCG GGTCCGCTAC
GAGGCGGTCA CCGACGCAGA GGCGCTCCAC GCCTTCCGCC GTCTCTCCCG CACCGAGGGG
ATCATCCCGG CGCTCGAGTC CGCCCACGCG GTCGCCTACG CTCTCCGGGC GGCGGACGAT
CTCGATAAGG ACGGCATCCT CGTCGTCAAC CTCTCGGGGA GGGGGGACAA GGATGTTGCC
GACGTCGCGA ACCTTCACGG GGGCGTTGCA TGA
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| Protein sequence | MKAGRYGVYG GQYVPETLMS ALIELEETYG RIREDPGFSR RLSWYLREYA GRETPLTYCG
NLSRDLGCRV YLKREDLLHG GAHKLNNTLG QALMAKFMGK RRLIAETGAG QHGVATAIAG
AALGLPVEVY MGEVDTRRQA LNVFRMELLG ARVVPVASGT RTLKDAINAA MRDWVANLRE
THYLLGSCVG PHPFPRIVRD FQSVIGEETR RQILEREGRL PDTVVACVGG GSNAIGIFYP
FVGDDVALVG VEAGGEGLDS GRHGASLSAG SVGVFQGALS YLLQDGDGQA LETHSVAAGL
DHPSVGPEHA MLKDSGRVRY EAVTDAEALH AFRRLSRTEG IIPALESAHA VAYALRAADD
LDKDGILVVN LSGRGDKDVA DVANLHGGVA
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