| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0070 |
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| Symbol | |
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| ID | 4848392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 64988 |
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| End bp | 66346 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640114741 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001045987 |
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| Protein GI | 126178022 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.531769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACGA AGATCCTCCT TGACGAGGAG GAGATGCCGA AACGGTGGTA CAACATCCAG
GCAGACCTCC CGACGCCCAT GGATCCGCCC CTTCACCCGG CTACCGGGAA ACCCGCGGTC
CCTGACGATC TCCGCCACAT CTTCCCGATG GAACTGATCC GGCAGGAGAT GAGCACCGAG
CGCTACATCG ATATCCCGGG CGAGGTCCGG GATATCCTGA CTCTCTGGAG GCCGAGCCCT
CTTTACCGGG CAAGAAGGCT TGAAGCGGCC TTGAAGACCC CGGCAAAGAT CTACTACAAG
TGGGAGGGCG TGAGCCCGCC GGGTTCGCAT AAGCCCAACA CCGCTATCCC CCAGGCCTAC
TACAACCGCG AAGAGGGGAT CGAGCGGCTC GCGACCGAGA CCGGGGCAGG ACAGTGGGGC
TCGTCGCTTG CGTTTGCAAC GAGCCTCTTC GATATGGAGT GTACTGTCTA CATGGTCCGT
TCCTCCTACG AACAGAAGCC CTATCGCAAA AGCATGATGC AGGTCTACGG CGCCGAGTGC
ATCCCGAGCC CGTCGGAGAA GACCCGGTCG GGCAAGGCGG TGCTGGACAA GGACCCGAAT
ACGCCGGGTT CCCTCGGCAT CGCCATCTCC GAGGCGGTCG AGGATGCGGC CGCCCACGAG
AACACGAACT ACGCCCTCGG CTCCGTCCTC AACCACGTCT GCCTCCACCA GACGATCATC
GGCCAGGAGG CACAGCAGCA GCTCGCGGCC GTGGACGCCT ATCCCGACGT GGTGATCGGG
TGCGTCGGCG GCGGCACGAA CTTTGCCGGG CTCTCGTTCC CGTTCGCGGG CGCGAAGATT
ACCGGGAAGC ATCCCGAGAC CGATATCATT GCGGTGGAGC CTTCCGCCTG CCCGACCCTG
ACGAAGGGGC TCTACGCCTA CGACTTCGGC GACGTTGCGG GGCTGACCCC GCTCATGCGG
ATGTTCACCC TCGGCCACGA CTTCGTCCCG CCGGCGATCC ATGCCGGAGG GCTCCGTTAC
CACGGGGCGT CGCCGCTCGT CTCCCGGCTC GTCCAGGATG GGATCGTCCG GCCGGTCGCC
TACCGGCAGA ACGAGGTCTT CGAGGCCGCC GTGATGTTCG CCCGGACGGA AGGGATCGTC
GTCGCGCCCG AGGCCGCTCA CGCGGTGAAG GCCGCGGTCG ACGAGGCGCT CCGGTGCCGG
GAGACCGGTG ACGCGAAGAC GATCCTCTTC AACAACTCCG GGCACGGCAA CTTCGATTTC
TCCTCCTACG AAGCCTACTT TGCAGGAAAG CTCGTCGACT ACGAGTACCC GGCGGAGCTG
ATCAAAGAGT CGCTCGCCCG GTTGCCGGTG ACGGGGTGA
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| Protein sequence | MQTKILLDEE EMPKRWYNIQ ADLPTPMDPP LHPATGKPAV PDDLRHIFPM ELIRQEMSTE
RYIDIPGEVR DILTLWRPSP LYRARRLEAA LKTPAKIYYK WEGVSPPGSH KPNTAIPQAY
YNREEGIERL ATETGAGQWG SSLAFATSLF DMECTVYMVR SSYEQKPYRK SMMQVYGAEC
IPSPSEKTRS GKAVLDKDPN TPGSLGIAIS EAVEDAAAHE NTNYALGSVL NHVCLHQTII
GQEAQQQLAA VDAYPDVVIG CVGGGTNFAG LSFPFAGAKI TGKHPETDII AVEPSACPTL
TKGLYAYDFG DVAGLTPLMR MFTLGHDFVP PAIHAGGLRY HGASPLVSRL VQDGIVRPVA
YRQNEVFEAA VMFARTEGIV VAPEAAHAVK AAVDEALRCR ETGDAKTILF NNSGHGNFDF
SSYEAYFAGK LVDYEYPAEL IKESLARLPV TG
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