Gene Memar_0064 details

Gene Information

• Locus tag: Memar_0064
• ID: 4848253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 60947
• End bp: 61615
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640114735
• Product: ABC transporter-related protein
• Protein accession: YP_001045981
• Protein GI: 126178016
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.283331
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGTCA TCAGTTTCGA GAACGTGACA AAGGTCTACC CCCTCCCGGC GGGCGACGTC 
GTGGCGCTGG CCGGGGTGGA TCTCGCCATC GAGAAGGGCG AGTTCGTCCT GATCATGGGC 
CCCTCGGGGT CGGGGAAGTC GACGCTCTTG AACATCATGG GCTCGCTCGA CGTTCCGACC 
TCAGGCGAGG TCACGATCGC CGAAAAGCGG ATCGGCGGGA TGGACGACGA CGACCTGACC 
CTTCTGCGGC GTGACCATAT CGGGTTCGTC TTCCAGCAGT TCAACCTGAT CCCGCTGCTT 
TCGATCGTCG AGAACGTCGA ATACCCCCTG ATCCTGAAAG GCCGGCAGAA CGGCACCCGG 
GAACGGGCGG AAGAAGTCCT CCAGGCGGTC GGGATCGAGA AGACCCATTT CACCCATAAG 
CCGGGTGAAA TCTCCGGCGG GCAGCAGCAG CGCGTGGCGA TTGCCCGCGC GCTCGTCAAC 
GACCCCGCCT TCCTCCTCTG TGACGAACCG ACCGGAAACC TGGACTCGAA GACCGGGACC 
GCCATCATGA CCCTCCTCGA CCGGATGAAT CGCGAGGAGG GCAAGACCGT CGTCATGGTC 
ACCCACGACC CCCGGATGAC CGAATACGCC GACCGCACCA TCCGCCTCGT CGACGGGAGG 
ATCGCATGA 

 

Protein sequence

MPVISFENVT KVYPLPAGDV VALAGVDLAI EKGEFVLIMG PSGSGKSTLL NIMGSLDVPT 
SGEVTIAEKR IGGMDDDDLT LLRRDHIGFV FQQFNLIPLL SIVENVEYPL ILKGRQNGTR 
ERAEEVLQAV GIEKTHFTHK PGEISGGQQQ RVAIARALVN DPAFLLCDEP TGNLDSKTGT 
AIMTLLDRMN REEGKTVVMV THDPRMTEYA DRTIRLVDGR IA