Gene Memar_0062 details

Gene Information

• Locus tag: Memar_0062
• ID: 4846795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 59141
• End bp: 59797
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640114733
• Product: hypothetical protein
• Protein accession: YP_001045979
• Protein GI: 126178014
• COG category: [S] Function unknown
• COG ID: [COG2881] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACTG GATTTCTCCG GGTGTTGTTT GATCCCGGGC GTTTCTTTGA AGCGCGCATG 
CAGGACAGAC CGAGCCTGAA GATACCGGCG CTGATCGCAG TCGTCATGGG GCTGATCGGT 
GCGGTCTCGG TCATACCGAT GACGGATATA ACCATGGCCA TGCTTCCCGC AGAGATGCAG 
GGCCTCGGGC TGCTCATGAC GATCATCTCC GCCGGCGTTG CCTTCGTCGG CGGGCTCCTG 
GGCTGGATCA TCTACGGTTT CGTCTTCCAC CTCGTCTCGA TGGTCTTCAA GGGTCAGGGC 
CCCCTCGAGC GGACGATGGA GTTCACCGGC TACGGTCTCC TCCCTCAGGT ATTCGGGGGG 
ATCATCGGGA CCTACTTCTC CTTCCAGCTC CTCTCGGGCC TGAACATCCC GCCCATGACA 
AGCCCCGAGC AGATGGTGGA GTTCTCCGAG GAACTGGTGA GCGTTCTCGC GACCGATCCT 
CTGGCGCAGA TCGCCGGGAT CGTGACCATC CTCTTCACGA TCTGGAGTGC GAACATCTGG 
GTCTTCGGTA TGAAGCACGC GCGGAACCTC TCCACGCGGG ACGCGGTTCT CACCGTCGGG 
ATACCCGTGG GGCTTTATAT CCTCTATCTG CTCATCAAAC TTGCCGGATG GCTGTAA 

 

Protein sequence

MDTGFLRVLF DPGRFFEARM QDRPSLKIPA LIAVVMGLIG AVSVIPMTDI TMAMLPAEMQ 
GLGLLMTIIS AGVAFVGGLL GWIIYGFVFH LVSMVFKGQG PLERTMEFTG YGLLPQVFGG 
IIGTYFSFQL LSGLNIPPMT SPEQMVEFSE ELVSVLATDP LAQIAGIVTI LFTIWSANIW 
VFGMKHARNL STRDAVLTVG IPVGLYILYL LIKLAGWL