| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0055 |
|---|
| Symbol | |
|---|
| ID | 4846548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 52570 |
|---|
| End bp | 52962 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640114726 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase |
|---|
| Protein accession | YP_001045972 |
|---|
| Protein GI | 126178007 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG TCACGGTTAT CTGCGGTTCC GCCTCGGACG GCCCCGTCGC GGAGAAAGTC
TTTGAGACCC TGAATCAGCA CGGCGTGTCC TACGACTACA AGGTGATATC GGCGCACCGT
GACCCCGAGC GGCTGGACGA GTACGTGAAG GCGAGCACCG CCCGGGTCTT CATCGCGATC
GCCGGGCTCT CGGCGGCCCT CCCGGGAGTG ATTGCCTCGA AGACGAAGCG GCCGGTGATC
GGTGTCCCAG TGAGCGGGAC GCTGATGGGT CTCGACGCCC TCCTCTCGAT CGCCCAGATG
CCGAAAGGGG TGCCGGTGGC CTGCGTCGGG GTGGACAACG GCGTGAACGC CGCCCTGCTC
GCGATCCGGA TCCTCGAGGC AGGGCGCGCC TGA
|
|---|
| Protein sequence | MADVTVICGS ASDGPVAEKV FETLNQHGVS YDYKVISAHR DPERLDEYVK ASTARVFIAI
AGLSAALPGV IASKTKRPVI GVPVSGTLMG LDALLSIAQM PKGVPVACVG VDNGVNAALL
AIRILEAGRA
|
|---|
| |