Gene Memar_0052 details

Gene Information

• Locus tag: Memar_0052
• ID: 4846800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 50122
• End bp: 50724
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640114723
• Product: beta-lactamase domain-containing protein
• Protein accession: YP_001045969
• Protein GI: 126178004
• COG category: [R] General function prediction only
• COG ID: [COG0491] Zn-dependent hydrolases, including glyoxylases

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGTCC GGTGGATCGC GAGCAATGCG ACCTACGCCA ATTCGTTCGT TTACGGAAAC 
ATCCTCATCG ACGCGGGCGT TCTCCCGATG GCGGTGGAGC CCTATGCCGC CGCGATCGAT 
ACGATCGTCA TCACCCATGC CCACTACGAC CATATCGCCC ACATCAAAGA GATCGCGCGG 
CTCTGCAGCG GTGCCGCCGT CTGCATCCAC GAGGCGGACG CGCCCGGCCT CCTCGACGAC 
GCCCGGAGCC TCTCGATGGT CTTCGGGGCC CACGCGCCCG GGATCGTCCC CGACACCGTT 
CTTGCCGACG GCGACCGGAT AGGGAACCTT TGCGTGATCC ACACCCCCGG GCACACCCCG 
GGCGGGATCT GCCTCTACAA TGAGGCGGAA AAATTGCTCT TCTCCGGAGA CACCGTCTTT 
ACCGGCGGCT CCTTCGGGCG CTACGACTTC CCGGGCGGCG ACCGGACGGC GCTCGCGGCA 
TCCATCGAGC GCCTCAGCGC CCTGGAGGTC GAGGGGCTCT ACCCCGGCCA CGGCGAACCC 
GTCGCCCGCG GCGGCGGAAG GCATATCGCG GCCGCCCGGG AGGCGCTCCG GCTCTATGGA 
TAA 

 

Protein sequence

MPVRWIASNA TYANSFVYGN ILIDAGVLPM AVEPYAAAID TIVITHAHYD HIAHIKEIAR 
LCSGAAVCIH EADAPGLLDD ARSLSMVFGA HAPGIVPDTV LADGDRIGNL CVIHTPGHTP 
GGICLYNEAE KLLFSGDTVF TGGSFGRYDF PGGDRTALAA SIERLSALEV EGLYPGHGEP 
VARGGGRHIA AAREALRLYG