| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0047 |
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| Symbol | |
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| ID | 4846745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 45850 |
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| End bp | 46938 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640114718 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001045964 |
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| Protein GI | 126177999 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTACT CGCTGCATAC GCTGCTCGAT GACACACTCG CCGGCCACCG GCTCACGGAA
GAGGAAGCGG TCCGCCTCCT TGCGACGCGC GACCGGGGCG TCTGGGAAAT CGCCGCCGCC
GCGGACGAAC TCCGCGAGCG GAAAGTCGGC AACGTCGTCA CCTACGTAAG GAACCAGAAC
ATCCACGTCA CCAACATCTG CAAGAACCTC TGCGGGTTCT GCGGGTTCGG GCGCCGGGCG
GACGATCCGG AAGCGTTCTA CGACGATACC GATGCGATCC GGGAGAAGGC ACGGGCGGCC
GCGGCGCGAA ACGTCACCGA GATCTGCCTC CTCTCCGGCG TCCACCCGGA CTACACCCTC
GACTCCTACG TCGACCTCAT CTCCTGCGTG CGGGAGGAGG CGCCCGGCAC GGACATCCAC
ACGGCAAGCC CCGACGAGAT CGCCTGGGCG GCGAAACAGA GCGGCGTCTC GACGAAAGAG
GCGATCGAGC GCCTGATCGA TGCGGGTCTC GGAACCCTGC AGGGGACCGC GGCCGAGATC
CTGGTGGACG ACGTTCGGCG GGTGATCTGC CCGGCCAAGT GCGACACGGC GACGTGGGTC
CGGATCATCA AGGAGGCACA TCGTCTCGGG CTCCGGTCGA CGGCGACGAT CATGTACGGC
TCCTCTGAGA GCGCGGGTGA TCGTGCCCGG CACCTTGCGA TCCTCCGCGA GATCCAGGAT
GAGACCGGCG GGTTCACCGA ACTGGTTCCG CTCTCCTTTC TCCACGAGAA CACCGCCATC
TACCAGAAGG GTCTCGCCCC CGCGGGCGCC ACCGGCCGCG AAGACCTCCT GCTCTTTGCA
GTCGCGCGGC TCTTCCTCGA CAACTTCGAC CACATCCAGA TCTCCTGGGG CAAGGTCGGG
ACGAAGATGG CAGAGCTCGG GCTTCTCTCC GGCGGCGACG ACCTCGGCGG GACGATGTTC
TGCGACGACG TCAGCACGGA TGCCGGCGGC GAGGGCGCCG ACTATCTCGA TCCTGCGGAG
ATGCAACGGA TCGCCGAGGA TCTCGGCCGG ACGCTCCGCC AGCGGACGAC GACCTACGAG
TTAGTGTGA
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| Protein sequence | MPYSLHTLLD DTLAGHRLTE EEAVRLLATR DRGVWEIAAA ADELRERKVG NVVTYVRNQN
IHVTNICKNL CGFCGFGRRA DDPEAFYDDT DAIREKARAA AARNVTEICL LSGVHPDYTL
DSYVDLISCV REEAPGTDIH TASPDEIAWA AKQSGVSTKE AIERLIDAGL GTLQGTAAEI
LVDDVRRVIC PAKCDTATWV RIIKEAHRLG LRSTATIMYG SSESAGDRAR HLAILREIQD
ETGGFTELVP LSFLHENTAI YQKGLAPAGA TGREDLLLFA VARLFLDNFD HIQISWGKVG
TKMAELGLLS GGDDLGGTMF CDDVSTDAGG EGADYLDPAE MQRIAEDLGR TLRQRTTTYE
LV
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