Gene Memar_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0027 
Symbol 
ID4846343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp20549 
End bp21382 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content62% 
IMG OID640114698 
ProductABC transporter-related protein 
Protein accessionYP_001045944 
Protein GI126177979 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTGA ACGTCAACAA CGCCTCGTTC TCGTACGACG GCATCACAAA ACAGTTCGAA 
GAGATCTCCC TCTCCCTCCG GCAAGGAGAG GTCCTCTCCC TCCTCGGGAG GAACGGGACC
GGAAAATCGA CCCTGATCAA GTGCATCTTA AACATCCTCA GGCTCCAGGG CGGGGAGGTG
GAGATCAACG GCCGCCGGGT CGCCGATATG CGGCCCGAGG AAGTCGCGCG GCAGGTCGGT
TACGTCCCCC AGGCCCACCA GGCTGTCTTC CCGTTCTCGG CGCTCGATTT CGTCCTCATG
GGGAGAGCCC CCCATATATC GGCCTTCTCG GTCCCGGGCG AAGAGGACTA CGAGAAGGCG
GAGGAGGCGT TTGAGCGGAT CGGGATCACC CATCTCCGGG AGAAGTCCAT CTCCGAGATG
TCGGGGGGGG AGTCGCAGAT GGTGATGATC GCCCGCGCCC TCGCCCAGGA GCCGTCGCTG
CTCATCCTCG ACGAACCGAC GTCGCATCTC GATATCGGCA ACCAGATGAA GACGATAGCG
ACTATCGACC AGCTCGCCGC CGACGGGATC GCCATCCTGA TGTGCACCCA CTTCCCCGAC
CATGCGTTCC TGATCTCGCA TTCGGCCGCC ATCCTCAATA AAGGCAGGCT GATCGCGCAG
GGCCGGGCCG AGGACGTCAT CACGAAGGAG AACCTCCGTG AAGCCTACGG GATCGATATC
TGCGTCCACT ACATCAAGGA GGCCGGGCGG ACGGTTTGCA TCCCGATGAA CCCGTGCGGC
TGCCGTGGCG GGGGAAGGGC GAATACCGCC GGGACAAAAC CCCACGGCAC CTAA
 
Protein sequence
MILNVNNASF SYDGITKQFE EISLSLRQGE VLSLLGRNGT GKSTLIKCIL NILRLQGGEV 
EINGRRVADM RPEEVARQVG YVPQAHQAVF PFSALDFVLM GRAPHISAFS VPGEEDYEKA
EEAFERIGIT HLREKSISEM SGGESQMVMI ARALAQEPSL LILDEPTSHL DIGNQMKTIA
TIDQLAADGI AILMCTHFPD HAFLISHSAA ILNKGRLIAQ GRAEDVITKE NLREAYGIDI
CVHYIKEAGR TVCIPMNPCG CRGGGRANTA GTKPHGT