| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0021 |
|---|
| Symbol | |
|---|
| ID | 4848444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 14670 |
|---|
| End bp | 15635 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114692 |
|---|
| Product | daunorubicin resistance ABC transporter ATPase subunit |
|---|
| Protein accession | YP_001045938 |
|---|
| Protein GI | 126177973 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCAAAG AGAACCGTGA CGATCCGTCG GCCGGTGGGC CGAACGTAAT CGAGGTCGAG
AACCTCACGA AGACCTTCGG CGCCGTCACC GCCGTGGACT GCGTCTCGTT TCACGTTCGG
CGGGGCGAGA TCTTCGGGTT CCTCGGGCCG AACGGCGCCG GGAAGACCAC CACCACGCGG
ATGCTCACCG GCGTCGTCCC GATGGACGGC GGGAGCGTGA GGATCTTCGG CCACGATATC
CTGAAGGAAC CGGTCCAGGC GAAACAGCGG TTCGGCGTCG TGCCCGAGAC CTCGAACGCC
TACGTCGAGC TCACCGCGTG GCAGAACCTC ATGCTGATGG GCGACCTCTA CGGGCTCGAC
CGCGCCCACT CGGAGCGGCG CTCACGCGAA CTCCTCGAAA CCCTCGGTCT CTACGGGAGG
AGGGACCAGA AGGTGCGGGG CTACTCGAAG GGGATGAAAC AGCGGCTCGT TCTCGCCATG
GCGCTCCTCC ACGAGCCCGA GCTCCTCTTC CTCGACGAAC CGACGAGCGG GCTCGACGTG
CAGAGCACGC AGATGATCCT CGTCCTCCTG CGCGAGCTGA ACACGGACGG AACCACCATC
TTTCTGACCA CCCACAACAT GGAGGAGGTG AACCGGCTCT GTGACCGCAT AGGCATCATC
CGGGCCGGAA AGATCGTCGC GATCGATGCT CCCGAGAGGC TGAAGACGGC GATCGACCGC
ATGCACCGGC TTGAGGTGAG CTTCGACCGG CCGGTGCCCG CCGACGCCCT CGCGGGACTC
GACGGCGTGG CCGAAGCGTA CCGGACGGGG GATAAGTGGC GGATCGTTAC GGAGGATCCG
GATCTCGTCA TCCGGTCGCT CGTGGCCTTC AGCGGCGATT GCAGTGTGGC GATCCTCACC
CTGAATACTC TCGCCCCGTC GCTCGACGAG GTCTTCCTGC GGCTGACCGG GGAGGAGCAA
CCGTGA
|
|---|
| Protein sequence | MIKENRDDPS AGGPNVIEVE NLTKTFGAVT AVDCVSFHVR RGEIFGFLGP NGAGKTTTTR
MLTGVVPMDG GSVRIFGHDI LKEPVQAKQR FGVVPETSNA YVELTAWQNL MLMGDLYGLD
RAHSERRSRE LLETLGLYGR RDQKVRGYSK GMKQRLVLAM ALLHEPELLF LDEPTSGLDV
QSTQMILVLL RELNTDGTTI FLTTHNMEEV NRLCDRIGII RAGKIVAIDA PERLKTAIDR
MHRLEVSFDR PVPADALAGL DGVAEAYRTG DKWRIVTEDP DLVIRSLVAF SGDCSVAILT
LNTLAPSLDE VFLRLTGEEQ P
|
|---|
| |