| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0015 |
|---|
| Symbol | |
|---|
| ID | 4847900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 10842 |
|---|
| End bp | 11747 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640114686 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001045932 |
|---|
| Protein GI | 126177967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.684774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCCG CTTCGAACCT GATCACCGCC GGAGAGTTCT TCGTCGTCAT CGCCGGGGAA
CTGGTTCTGC TCTTTGTGGG GATCACCTTC CTGGTCGGGC TCCTCCAGGC CTACATTCCC
GAAGAACGGA TCCGGAGCGT GCTCGCCGGG AGGCGACAGG GTGCCGGGAA TGTCCTTTCT
GCCGGGTTCG GCGCCCTCAC CCCGTTCTGC TCCTGCTCGA CGATCCCGAT CCTGCTCGGC
CTCCTCGACA TCGGGGTCCC ATTCGGCGTC TGCATGTCGT TCCTGCTCGC ATCCCCGCTC
CTGAACCCGG TGATCCTCGC CCTTCTCGTG GCGCTGGTGG GAATCGTCCC GACCGCCATC
TACGCCGCCC TTACCTTCAC GGCCGCGATC GTCATAGGCT GGCTCCTCGG ACGGCTCGGC
TACGCCCGCT ACGTGAAAGA CGTCATGGTC GAAGGCCGGC CGGAACCGTG CGGCTGCAAC
AGCAGCCACG GGACGCGGAT TCGCGGTGCG TTCTCCTTCG CCGTCCGTCT CTTCCAGCAG
GTCTTCCCCT ACCTCATCCT CGGAGCGGGG ATCGGGGCGT TCATCTACGG GTTCATCCCC
GGAGACCTGA TCGTCTCTCT CGCGGGGCCG GACAACCCCC TCGCCATCCC GGTCGCGGCG
GTCATCGGCA TCCCGATGTA CATCCGGGCG GAGACGCTCA TTCCCGTGAG CGCCGTCCTC
CTCGAGAAGG GGATGGGCAT CGGCGCCGTG ATGGCACTGA TCATCGGCGG TGCAGGAGCG
AGCATCCCGG AGGTGACGCT GCTCGCCGCG ATCTTCGAGC GGAGACTGGT CGCCGCGTTC
GTCGCGGTCA TCCTCGGCGT CGCCGTCCTC GCCGGCGCGG CCTTCCAGGT CCTCGCCGCC
ATCTGA
|
|---|
| Protein sequence | MDAASNLITA GEFFVVIAGE LVLLFVGITF LVGLLQAYIP EERIRSVLAG RRQGAGNVLS
AGFGALTPFC SCSTIPILLG LLDIGVPFGV CMSFLLASPL LNPVILALLV ALVGIVPTAI
YAALTFTAAI VIGWLLGRLG YARYVKDVMV EGRPEPCGCN SSHGTRIRGA FSFAVRLFQQ
VFPYLILGAG IGAFIYGFIP GDLIVSLAGP DNPLAIPVAA VIGIPMYIRA ETLIPVSAVL
LEKGMGIGAV MALIIGGAGA SIPEVTLLAA IFERRLVAAF VAVILGVAVL AGAAFQVLAA
I
|
|---|
| |