| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0008 |
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| Symbol | |
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| ID | 4847148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 5770 |
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| End bp | 6690 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114679 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_001045925 |
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| Protein GI | 126177960 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGG CAGCGGTCGT AGTCGCCGCG TCGTTGCTGG TGGACCGGCT GGTCGGCGAC
CCGCACTCAC GCTACCACCC GGTGGCAATC CTCGGCCGGT TCATTGGGTG GTGGGGGGTC
CCGGCCCGCT ACCCGCCCGG CATCCAGCGG GTTGCCGGGG TTGCGGGAGC CGTCCTGACC
GTCGCGCTCT TTGCCGCCCC GTTTGCGCTC GTCCAGTTCG CGGCCCCCTG GTACCTCTAT
CTTCTCCTCG CGCCCTTCCT GCTCAAGACC TGTCTCGCCT GGCGGGCGCT CGAGGAGCAT
GCCGCCGCCG TGGTCCAGGC GCTCGATGAC GGCGGGATCG ATGCGGGCCG CTGCGAGGTC
GGGATGATGG TGAGCCGGGA TACGGCGCGC CTCGATCCCG AGCACGTCCT CTCGGCCGCG
TATGAATCGA TGACCGAGAA CCTTGTCGAC AGCATCGTCT CCCCGCTCTT CTACTTCGGG
CTCTTCGGGC TTACCGGGGC TGCAGCCTTC CGGGCGGTCA ACACCCTGGA CGCCATGCTC
GGCTACCGCG ACGAGCGGCT CCGGCTCGGG TGGTTCCCCG CCCGCGCCGA CGATATCGCA
AACTTCGTCC CGGCGCGGCT GACCGGCCTC ATCCTTCTCG CCTACTTTGC GGCGAAAGGC
CGGTTCGGAC CGGCCTGGGC GGCCCTTCGC CGCGACGCGA AGAAACGCCC CGGATTCAAC
GGCGGGATCC CGATGGCCGT CATTGCCGGC GGCGTCGGCG TCCGGCTCGA GAAGCCCGGT
GCCTACACCA TCGGGGACCC GGAGCGGACC CTTGCGGAGG CTGGCGCCGG GATCGTCCGT
GCGGTCCGTG CGGCGACGAT CATCTTTGCG ATCCTGGAGA TCGCCGCACT ATTTTTATTG
TGGTCAATGA GCTATACATA G
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| Protein sequence | MAAAAVVVAA SLLVDRLVGD PHSRYHPVAI LGRFIGWWGV PARYPPGIQR VAGVAGAVLT
VALFAAPFAL VQFAAPWYLY LLLAPFLLKT CLAWRALEEH AAAVVQALDD GGIDAGRCEV
GMMVSRDTAR LDPEHVLSAA YESMTENLVD SIVSPLFYFG LFGLTGAAAF RAVNTLDAML
GYRDERLRLG WFPARADDIA NFVPARLTGL ILLAYFAAKG RFGPAWAALR RDAKKRPGFN
GGIPMAVIAG GVGVRLEKPG AYTIGDPERT LAEAGAGIVR AVRAATIIFA ILEIAALFLL
WSMSYT
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