Gene Memar_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0002 
Symbol 
ID4846223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1757 
End bp2248 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID640114673 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001045919 
Protein GI126177954 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.355793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA AGGACCGTAT CCTCCTCCAT CTCCTGGAGG AGAACTGCCG CACCCCCGTA 
AGCGAACTCG CGGTGCTGGC CGAGATGAGC GAGCAGGACG TGAAGGATCG GATCGGCCGG 
CTGGAAGTGG CAGGCGCCAT CCGCCGCTAC GGGGCGGTTG TCGACTGGGA GCGGGCCGGC 
GACGGAAACG TCGCTGCAGT GCTCGAACTC AAAGTCTCGC CCGAGCGGGA CTTCGGCTAC 
GACCGGATCG CCGAGCGGAT CACCCGGTTC CCGCAGGTCC GGTCGCTCCG CCTGATGACT 
GGCGCGTACG ACCTTCAGAT CCTGGTCACC GGGCCGAGCA TGCACGAGAT CGCGCGGTTC 
GTCTCCGAGC AGATCGCCCC GATGGACCGG ATCCGGGAGA CGGCGACGCA CATCATCATG 
AAGACCTACA AGGAGAACGG CACCACCTTC GCCGAGCGCG AAGAGGTCGA GCGGCTCCCC 
TACTCATTCT GA
 
Protein sequence
MDEKDRILLH LLEENCRTPV SELAVLAEMS EQDVKDRIGR LEVAGAIRRY GAVVDWERAG 
DGNVAAVLEL KVSPERDFGY DRIAERITRF PQVRSLRLMT GAYDLQILVT GPSMHEIARF 
VSEQIAPMDR IRETATHIIM KTYKENGTTF AEREEVERLP YSF