Gene Rsph17029_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4064 
Symbol 
ID4898985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1215588 
End bp1216565 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID640114668 
ProductABC transporter related 
Protein accessionYP_001045914 
Protein GI126464801 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.484241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCG GACACGATCT CGAACTCGTG CATGTGACGA AGCGCTACGG CGGCTCGGCC 
GTCGCGGTCG CGGATGTGAG CCACCTTTTC GTGGGGGGCA GTTACGTCTG CCTCCTCGGG
CCTTCGGGCT GCGGCAAATC CTCGACCCTG CGGATGATCG CGGGCCACGA GACGGTGACC
GAGGGCTCGA TCCTCCTGTC GGGCAAGGAT GTGACGCGGC TGCCGCCCGC GCGCCGCGGC
ACGGCGATGA TGTTTCAGAG CTACGCGCTC TTTCCGCATC TGTCGGTGAC GGACAATGTG
GCCTTCTCGC TGAAGATGAA GGGGGTGGAG GCCGCCCAGC GCCGGGCGAA GGCGGCCGAG
ATGCTCGAGC TCGTCGACAT GGGCCGCTAT GCCGACCGGC TGCCCGCGCA GCTCTCGGGC
GGCCAGCAGC AGCGCGTGGC GCTGGCGCGC GCGCTCATCA CCGGGCCGCA GGTGCTGCTG
CTCGACGAGC CCTTGTCGGC GCTGGATCCG TTCCTCCGCA TCCGGATGCG CGCCGAGCTG
AAGCGGCTTC AGCGCGAGCT CGGGATCTCC TTCATCCATG TCACCCACGG GCAGGACGAG
GCGCTGGCCT TGGCCGACGA GATCGTGGTG ATGAACAACG CCAAGATCGA GCAGGCGGGC
CCCGCGCGCG ACGTCTTCAA CGCGCCCCGC ACCGAGTTCG TGGCCCGCTT CATGGGCGGG
CACAATGTGG TGGCGCTGCC GCAGGGCCGC TTCGCGCTGC GCTGCGACGA GATCCGTCTC
GACCCGGCCG GGCAGGAGGC CGTGGTGCAG GCGGTGGAAT ATCAGGGCGC GCATGTGGCG
CTGACCCTGC GGGCCGCCGG AGATCAGGAG CTCGTGGCCC TGATCCCCGA GGCGACCTTC
TTCGAGCAAC CGAAAAACCC CGGCGAGTCC GTGCACCTCG CCTGGGACGA GGGGCGGATG
CACCGCCTTC AGGTCTGA
 
Protein sequence
MRTGHDLELV HVTKRYGGSA VAVADVSHLF VGGSYVCLLG PSGCGKSSTL RMIAGHETVT 
EGSILLSGKD VTRLPPARRG TAMMFQSYAL FPHLSVTDNV AFSLKMKGVE AAQRRAKAAE
MLELVDMGRY ADRLPAQLSG GQQQRVALAR ALITGPQVLL LDEPLSALDP FLRIRMRAEL
KRLQRELGIS FIHVTHGQDE ALALADEIVV MNNAKIEQAG PARDVFNAPR TEFVARFMGG
HNVVALPQGR FALRCDEIRL DPAGQEAVVQ AVEYQGAHVA LTLRAAGDQE LVALIPEATF
FEQPKNPGES VHLAWDEGRM HRLQV