Gene Rsph17029_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4027 
Symbol 
ID4898628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1173872 
End bp1174570 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID640114630 
ProductABC transporter related 
Protein accessionYP_001045877 
Protein GI126464764 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.578971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCC TGGAGGTCAA CGGCCTTCAC GCCTGGTATG GCGAGAGCCA CATCCTGCAC 
GGGGTGGATC TGTTCGTCGA GGAAGGCGAG ACGATCTGCA TCCTCGGTCG CAACGGCATG
GGCAAGACCA CGACGCTGCG CACGATCATG GGGATCCTGA GGAAGCGCAC CGGGGCGATC
CGGTTCGCGG GCAAGGACAT GATGGGCGTG CCGCTGCATC GCACGGCTCG CGAGGGGCTG
GGCTTCGTGC CCGAGGAACG GGGCATCTTC GCCACGCTCT CGGTCGAGGA GAACCTGATG
CTGCCCCCGG TAGTCGCCAA GGGCGGCATG TCGGTGGGAG AGATCTACGA GCTGTTTCCG
AACCTGAAGG AGCGGCGCTC GAGCCCCGGC ACCAAGCTGT CGGGCGGCGA GCAGCAGATG
CTCGCCATGG CGCGGATCCT GCGCACCGGC GCGCGCTGCC TGCTGCTGGA CGAGCCGACA
GAGGGTCTCG CCCCGGTCAT CATCCAGCGG ATCGGCGAGG TGCTGATCGA GCTGCGCGAC
CGCGGCATGA CCGTGGTGCT GGTCGAGCAG AATTTCCGCT TCGCCTCGAA GGTTGCGGAC
CGTTTCTACC TCATGGACCA CGGACGGATG GTGGCGGATT TCCCGGTCGA GGAGCTGCCC
GAGAACATGC CGATGCTGAA TTCGGTGCTG GGGGTGTGA
 
Protein sequence
MTLLEVNGLH AWYGESHILH GVDLFVEEGE TICILGRNGM GKTTTLRTIM GILRKRTGAI 
RFAGKDMMGV PLHRTAREGL GFVPEERGIF ATLSVEENLM LPPVVAKGGM SVGEIYELFP
NLKERRSSPG TKLSGGEQQM LAMARILRTG ARCLLLDEPT EGLAPVIIQR IGEVLIELRD
RGMTVVLVEQ NFRFASKVAD RFYLMDHGRM VADFPVEELP ENMPMLNSVL GV