Gene Rsph17029_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4025 
Symbol 
ID4899061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1171983 
End bp1172981 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID640114628 
Productinner-membrane translocator 
Protein accessionYP_001045875 
Protein GI126464762 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG GTTCTGCATC TCCGGCCGCC CCTGCGGTGG CCGCCCATCC CCGGGCCGGC 
ACGCTCAAGC TCGTGCTGCT CCTGATCGCC GCCGCGGCGC TGATCGCGGC CCCCTTCTTC
CTCTATCCGA TCTTCCTGAT GAAGCTGCTG TGCTTCGCTT TGTTCGCGGC CGCCTTCAAC
CTGCTTCTGG GCTACACGGG CCTTCTCTCC TTCGGCCATG CCACCTTCTT CGGCGGCTCG
GCCTATTTCA CAGCCCATGC GGTGAAGGTG TGGGGCTGGC CGCCCGAGTT CGGCATCCTT
CTGGGCGTGG CGGGCGCGGC GGCTCTGGGG CTCCTCATGG GGGTCATCGC GATCCGGCGG
CAGGGGATCT ACTTCGCCAT GATCACGCTC GCCCTCAGCC AGATGTTCTT CTTCTTCTGC
CTGCAGGCGG CCTTCACCCA TGGCGAGGAC GGGATCCAGT CGGTCCCGCG CGGCCATCTC
TTCGGCGTCA TCGACCTCTC GAACGCGACC AACATGTATT TCTTCGTGCT GGGCACCTTC
ACGCTGGGGA TGCTCGCGAT CTGGCGCTTC GTGAATTCGC CCTTCGGCAT GATCCTGAAG
GCCATCCGCG AGAACGAGCC GCGGGCGATC TCGCTCGGCT ACTCGGTCGC GGAATACAAG
CTCGGCGCCT TCGTGATGTC GGCCGCGCTG GCGGGCCTCG CGGGCGGGGT CAAGGCGCTG
GTCTTCCAGT TCGCCACCCT CACCGATGTG GGCTGGCAGA TGTCGGGCGA GGTCATCCTG
ATGACGCTCC TCGGCGGGAT CGGCACGCTC GTCGGGCCGG TCGTGGGATC GGCGCTGGTG
GTGACGCTGC AGAACTACCT CGCCACCTCG CAATTCCCGG TCACGATCAT CACCGGCCTC
GTCTTCATGG CCTGCGTGCT GCTCTTCCGC CGCGGGATCG TCGGCGAGTT CTACGCCTCG
CGCCTCGGCC GCCGGCTCGG CTTCCGGTCG GAGAGCTGA
 
Protein sequence
MARGSASPAA PAVAAHPRAG TLKLVLLLIA AAALIAAPFF LYPIFLMKLL CFALFAAAFN 
LLLGYTGLLS FGHATFFGGS AYFTAHAVKV WGWPPEFGIL LGVAGAAALG LLMGVIAIRR
QGIYFAMITL ALSQMFFFFC LQAAFTHGED GIQSVPRGHL FGVIDLSNAT NMYFFVLGTF
TLGMLAIWRF VNSPFGMILK AIRENEPRAI SLGYSVAEYK LGAFVMSAAL AGLAGGVKAL
VFQFATLTDV GWQMSGEVIL MTLLGGIGTL VGPVVGSALV VTLQNYLATS QFPVTIITGL
VFMACVLLFR RGIVGEFYAS RLGRRLGFRS ES