| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4004 |
|---|
| Symbol | |
|---|
| ID | 4899144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1148065 |
|---|
| End bp | 1149444 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640114607 |
|---|
| Product | ribulose bisphosphate carboxylase |
|---|
| Protein accession | YP_001045854 |
|---|
| Protein GI | 126464741 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.988794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGT CCAACCGCTA CGCCCGGCTT GATCTGAAGG AAGCCGATCT GATCGCAGGC
GGCCGTCACG TTCTCTGCGC CTATGTCATG AAGCCCAAGG CGGGCTACGG CTATCTGGAG
ACGGCGGCCC ACTTCGCGGC CGAGAGCTCG ACCGGCACCA ACGTCGAGGT CTCGACCACC
GACGATTTCA CCCGCGGCGT CGATGCGCTC GTCTACGAGA TCGACCCGGA GAAGGAGATC
ATGAAGATCG CCTATCCGGT CGAGCTCTTC GACCGCAACA TCATCGACGG GCGGGCGATG
CTCTGCTCGT TCCTGACGCT GACGATCGGC AACAACCAGG GCATGGGCGA TGTCGAATAT
GCCAAGATGC ACGATTTCTA CGTGCCGCCC TGCTATCTGC GCCTGTTCGA CGGCCCCTCG
ATGAACATCG CCGACATGTG GCGCGTGCTG GGGCGCGACG TGCGCAACGG CGGCATGGTG
GTGGGCACGA TCATCAAGCC GAAGCTCGGG CTGCGGCCGA AACCCTTCGC AGATGCCTGC
CACGAGTTCT GGCTGGGCGG CGACTTCATC AAGAACGACG AGCCGCAGGG CAACCAGACC
TTCGCGCCGC TGAAGGAGAC GATCCGCCTC GTGGCCGATG CGATGAAGCG CGCGCAGGAC
GAGACCGGCG AGGCCAAGCT CTTCTCGGCC AACATCACCG CGGACGACCA TTACGAGATG
GTGGCGCGCG GGGAATACAT CCTCGAGACC TTCGGCGAGA ATGCCGACCA TGTGGCCTTC
CTCGTCGACG GCTATGTGAC GGGCCCCGCG GCCATCACCA CCGCGCGGCG CCAGTTCCCG
CGCCAGTTCC TGCATTATCA CCGGGCGGGG CACGGCGCCG TCACCTCGCC GCAGTCGATG
CGGGGCTATA CGGCCTTCGT GCTCTCGAAG ATGGCGCGCC TGCAGGGGGC CTCGGGCATC
CACACCGGCA CCATGGGCTA TGGCAAGATG GAGGGCGAGG CGGCCGACAA GATCATGGCC
TACATGCTGA CCGACGAGGC GGCCGAGGGG CCCTTCTACC GTCAGGACTG GCTGGGGCTG
AAGGCCACGA CGCCCATCAT CTCGGGCGGC ATGAACGCGC TGCGGCTGCC GGGCTTCTTC
GACAATCTCG GCCATTCCAA CGTGATCCAG ACCTCGGGCG GCGGCGCCTT CGGCCATCTC
GACGGCGGCA CGGCGGGGGC GAAGTCGCTG CGCCAGTCGC ACGAGGCCTG GATGGCGGGG
GTGGATCTCG TGACCTATGC CCGCGAGCAT CGCGAGCTTG CCCGTGCCTT CGAGAGCTTC
CCCGCGGATG CCGACAAGTT CTATCCGGGC TGGCGCGACC GGCTGCAGCG CGCAGCCTGA
|
|---|
| Protein sequence | MDQSNRYARL DLKEADLIAG GRHVLCAYVM KPKAGYGYLE TAAHFAAESS TGTNVEVSTT
DDFTRGVDAL VYEIDPEKEI MKIAYPVELF DRNIIDGRAM LCSFLTLTIG NNQGMGDVEY
AKMHDFYVPP CYLRLFDGPS MNIADMWRVL GRDVRNGGMV VGTIIKPKLG LRPKPFADAC
HEFWLGGDFI KNDEPQGNQT FAPLKETIRL VADAMKRAQD ETGEAKLFSA NITADDHYEM
VARGEYILET FGENADHVAF LVDGYVTGPA AITTARRQFP RQFLHYHRAG HGAVTSPQSM
RGYTAFVLSK MARLQGASGI HTGTMGYGKM EGEAADKIMA YMLTDEAAEG PFYRQDWLGL
KATTPIISGG MNALRLPGFF DNLGHSNVIQ TSGGGAFGHL DGGTAGAKSL RQSHEAWMAG
VDLVTYAREH RELARAFESF PADADKFYPG WRDRLQRAA
|
|---|
| |