| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4001 |
|---|
| Symbol | |
|---|
| ID | 4899140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1143907 |
|---|
| End bp | 1145880 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640114604 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_001045851 |
|---|
| Protein GI | 126464738 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.923943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA TTGGAGCCGC GCAGGAGACG CGGATGGCGA ACGCCATCCG GGCCCTCGCG
ATGGATGCGG TGGAGAAGGC CAAGTCGGGC CATCCCGGGA TGCCGATGGG GATGGCGGAC
GCGGCGACCG TCCTCTTCAA CCGCTTTCTC ACGGTCGATC CTTCGGCGCC GAAATGGCCC
GACCGCGACC GGTTCGTGCT GTCGGCGGGG CATGGCTCGA TGCTGCTCTA TGCCATCCAT
CATCTGCTGG GCTATGCCGA CATGGACATG GATCAGATCC GGTCCTTCCG CCAGCTCGGC
GCGCGGACGG CGGGCCACCC GGAATACGGC CATGCCGACG GGATCGAGGT CACGACCGGG
CCGCTCGGTC AGGGGATCGC GACCGCGGTG GGCATGGCGC TGGCCGAGCG CATGAAAAAC
GCGCGGTACG ACGATGATCT GGTAGACCAT TTCACCTATG TCATCGCGGG CGACGGCTGC
CTGATGGAGG GCATCTCGCA CGAGGCCATC GACATGGCGG GCCATCTGGG CCTCGGCCGG
CTGATCGTGC TCTGGGACGA CAACCGCATC ACCATCGACG GCGACACGGG CATCTCGACC
TCGACCGACC AGAAGGCGCG GTTCGCCGCC TCGGGCTGGC ATGTGCTGGC CTGCGACGGT
CATGCGCCCG AGGAGATCGC CGCCGCCATC GAGGCCGCGC GGCGCGACCC CCGGCCCTCG
ATGATCGCCT GCCGCACGGT GATCGGCTAC GGCGCGCCGA ACAAGCAGGG CGGCCATGAT
GTCCACGGCG CGCCGCTGGG CGCGGCCGAG ATCGCCGCCG CGCGCGAGCG GCTCGGCTGG
GACCATCCGC CCTTCGAAAT CCCCGCGGAT CTCTACGAGG CCTGGGGCCG GATCGCCGCC
CGTGGCGCCG ACGCCCGCGC GGCCTGGGAA ACACGCCTTC AGGCGAGCCC CCTCCGCGCC
GCCTTCGAGA CGGCGGAAGC GGCCGACACC TCGGCGCTGC CGCCGGCCAT CGCGGCCTAC
AAGGCGCGGC TCTCGGCCGA GGCGCCCAAG GTCGCGACCC GGAAGGCCTC GGAAATGGCG
CTGGGTGTGG TCAACGAGGC GCTGCCTTTC GCGGTCGGCG GCTCGGCCGA CCTGACGGGC
TCGAACCTGA CCCGCTCGAA GGGCATGGTC TCGGTCGCGC CGGGCGCCTT CGCGGGCAGT
TACATCCATT ACGGCATCCG CGAGCACGGC ATGGCCGCCG CGATGAACGG GATCGCGCTG
CATGGCGGCC TGCGCCCCTA TGGCGGCACC TTCATGGCCT TCGCGGACTA TTGCCGGCCC
TCGATCCGAC TCTCGGCGCT GATGGGCGTG CCGGTGACCT ATGTCATGAC GCACGATTCC
ATCGGGCTCG GCGAGGATGG GCCCACGCAC CAGCCGGTCG AGCATCTGGC GAGCCTGCGG
GCGATCCCGA ACCTTGCGGT GATCCGGCCT GCGGATGCGG TCGAGACCGC CGAGGCCTGG
GAGATCGCCA TGACGGCGAC ATCCACGCCC ACGCTTCTGG TGCTGTCGCG CCAGAACCTG
CCCACGGTGC GGACCGAACA TCGGGACGAG AACCTGACCG CGCGCGGCGC CTATCTCCTG
CGGGATCCGG GCGAGCGACA GGTGACGCTG ATCGCGACCG GCTCGGAGCT GGAGCTGGCG
CTGGCCGCGG CGGATCTTCT GGCCGCGGAA GGCATCGCCG CCGCCGTGGT CTCGGCGCCC
TGCTTCGAGC TCTTCGCCGC GCAGCCCGCC GATTACCGGG CGACGGTTCT GGGTCAGGCC
CCGCGTGTGG GTTGCGAGGC GGCGCTGCGG CAGGGGTGGG ATCTCTTCCT CGGACCGCAG
GACGGGTTCG TGGGCATGAC GGGCTTCGGC GCTTCGGCGC CCGCGCCCGC GCTCTATCAA
CATTTCAACA TCACCGCCGA AGCCATTGTC AGCTCGGCAA AAGAACGGAT CTGA
|
|---|
| Protein sequence | MKDIGAAQET RMANAIRALA MDAVEKAKSG HPGMPMGMAD AATVLFNRFL TVDPSAPKWP
DRDRFVLSAG HGSMLLYAIH HLLGYADMDM DQIRSFRQLG ARTAGHPEYG HADGIEVTTG
PLGQGIATAV GMALAERMKN ARYDDDLVDH FTYVIAGDGC LMEGISHEAI DMAGHLGLGR
LIVLWDDNRI TIDGDTGIST STDQKARFAA SGWHVLACDG HAPEEIAAAI EAARRDPRPS
MIACRTVIGY GAPNKQGGHD VHGAPLGAAE IAAARERLGW DHPPFEIPAD LYEAWGRIAA
RGADARAAWE TRLQASPLRA AFETAEAADT SALPPAIAAY KARLSAEAPK VATRKASEMA
LGVVNEALPF AVGGSADLTG SNLTRSKGMV SVAPGAFAGS YIHYGIREHG MAAAMNGIAL
HGGLRPYGGT FMAFADYCRP SIRLSALMGV PVTYVMTHDS IGLGEDGPTH QPVEHLASLR
AIPNLAVIRP ADAVETAEAW EIAMTATSTP TLLVLSRQNL PTVRTEHRDE NLTARGAYLL
RDPGERQVTL IATGSELELA LAAADLLAAE GIAAAVVSAP CFELFAAQPA DYRATVLGQA
PRVGCEAALR QGWDLFLGPQ DGFVGMTGFG ASAPAPALYQ HFNITAEAIV SSAKERI
|
|---|
| |