| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3988 |
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| Symbol | |
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| ID | 4898698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 1132302 |
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| End bp | 1133924 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640114591 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001045838 |
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| Protein GI | 126464725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TGCTCGCCTC CACCGCCGTG ATGCTGGCGC TCGCCCTGCC CGCCGCAGCC
CAGGACTATA CGCCCGACCC GAACGCCAGG CCCGGCGGCA CGATCACCAT CACCTACAAG
GACGATGTGG CGACGCTCGA TCCGGCCATC GGCTACGACT GGCAGAACTG GTCGATGATC
AAATCGATCT TCGACGGGCT GATGGATTAC GTCCCCGGCA CGACCGAGCT GCGCCCGGGT
CTCGCCGAGA GCTACGAGAT CTCGGAGGAC GGGCTCACCT ATACGTTCAA GCTGCGCCCG
GGCGTGACAT TCCACAACGG CCGCGAGATG ACGGCCGAGG ATGTGAAATA TTCGCTCGAC
CGCGTGACGC TGCCCGCGAC CCAGTCGCCG GGAGCGGGCT TCTTCGGCTC GATCAAGGGC
TTCGATGCGA TGGCCGACGG CTCGGCCACC ACGCTCGAGG GCGTGACGGT GGTCGATCCC
TCGACCGTGA AGATCGAGCT CTCGCGTCCC GACGCCACCT TCCTGCATGT GATGGCGCTG
AACTTCGCCT CGGTGGTGCC GAAGGAGGCC GTCGAGGCGG CGGGCGCCGA CTTCGGCAAG
CAGCCGGTCG GCACCGGGGC CTTCAAGCTC GCCGAATGGA CCCTCGGCCA ACGGCTCGTC
TTCGAGAAGA ACGCCGATTA CTGGCGCGAG GGCGTGCCCT ATCTCGACAG CATCGTCTTC
GAAGTGGGAC AGGAGCCGAT TGTGGCGCTG CTGCGGCTGC AGAACGGCGA GGTGGACGTG
CCCGGCGACG GCATTCCGCC TGCGAAATTC ACCGAAGTGA TGGCCGATCC GGCGCAGGCC
GAGCGCGTGG TCGAGGGCGG CCAGCTGCAC ACGGGCTACA TCACGATGAA CGTGACCCAG
CCGCCCTTCG ACAATCTGCA GGTCCGTCAG GCCGTCAACA TGGCGATCAA CAAGCAGCGG
ATCACCCAGA TCATCAACGG CCGCGCGATC CCCGCGACCC AGCCGCTGCC GCCCTCGATG
CCGGGCTATA CCGAAGGCTA CGAGGGCTAT CCGCACGATG TCGAGAAGGC CAAGGCGCTG
CTCTCCGAGG CGGGCTTCGC CGACGGGTTC GAGACCGAGC TCTATGTGAT GAACACCGAC
CCGAACCCGC GCATCGCGCA GGCGATCCAG CAGGATCTGT CGCAGATCGG CATCAAGGCC
GCGATCCAGA GCCTCGCGCA GGCCAATGTG ATCGAGGCCG GCGGCAATGG CTCGGCGCCG
ATGATCTGGT CGGGCGGCAT GGCCTGGATC GCGGATTTCC CCGATCCGTC CAACTTCTAC
GGCCCGATCC TCGGCTGCGC GGGCGCGGCT GACGGCGGCT GGAACTGGTC GAAATTCTGC
GACGAGGCGC TCGACGCCAA GGCCACCGAG GCCGACAGCC TCGCCGATCC GGCCCGTGCC
GAGGAGCGGC TGAAGCTCTG GTCCGACGTC TATATGGGCG TGATGGAGAA GGCGCCGTGG
GTGCCCGTCT TCAACGAACA GCGCTACACG ATGAAATCCG CGCGCATGGG CGGCGACGAC
AGCCTCTATG TCGATCCCGT CTCGATCCCC GTGAACTACG ACTATGTCTT CGTGACCGAG
TAA
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| Protein sequence | MKRLLASTAV MLALALPAAA QDYTPDPNAR PGGTITITYK DDVATLDPAI GYDWQNWSMI
KSIFDGLMDY VPGTTELRPG LAESYEISED GLTYTFKLRP GVTFHNGREM TAEDVKYSLD
RVTLPATQSP GAGFFGSIKG FDAMADGSAT TLEGVTVVDP STVKIELSRP DATFLHVMAL
NFASVVPKEA VEAAGADFGK QPVGTGAFKL AEWTLGQRLV FEKNADYWRE GVPYLDSIVF
EVGQEPIVAL LRLQNGEVDV PGDGIPPAKF TEVMADPAQA ERVVEGGQLH TGYITMNVTQ
PPFDNLQVRQ AVNMAINKQR ITQIINGRAI PATQPLPPSM PGYTEGYEGY PHDVEKAKAL
LSEAGFADGF ETELYVMNTD PNPRIAQAIQ QDLSQIGIKA AIQSLAQANV IEAGGNGSAP
MIWSGGMAWI ADFPDPSNFY GPILGCAGAA DGGWNWSKFC DEALDAKATE ADSLADPARA
EERLKLWSDV YMGVMEKAPW VPVFNEQRYT MKSARMGGDD SLYVDPVSIP VNYDYVFVTE
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