| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3978 |
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| Symbol | |
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| ID | 4898815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 1118845 |
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| End bp | 1120296 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640114581 |
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| Product | protease Do |
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| Protein accession | YP_001045828 |
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| Protein GI | 126464715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0104728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC CCACCCCGCG TTCCTCGCTG AAGGCCGTCC TGATCGCCAG CACCCTCATC
ACCGCCGGTG TCGCCGGCAC GGCCCTGCCG CCGACGGCGG CCCGGGCCGA GGTGCCGATG
CAGGGCTATG CCGATCTCGT CGCCCGCGTC TCGCCCGCCG TCGTCTTCAT CGAGGTGACG
GCCAAGTCGA AGGAGTCCAC GCCGATGGCG GGCTCTCCCT TCGAGGAATT CCTCCGCCGC
TTCGGCGAGA TCGACCCGCA GTTCCGCATG CCGCAGGCCC CCGAGGGCGG GCAGGTCATG
CACGGGCTCG GGTCGGGCTT CCTGATCTCG CAGGACGGCA TCATCGTCAC CAACAACCAT
GTGGTCGAAA ATGCGACCGA CATGAAGGTC AAGCTCGAGG ACGGCCGCGA GTTCAAGGCC
GAAGTCGTGG GCACGGATCC GATGACCGAC ATCGCGGTGA TCCGGCTGAA GGATGCCAAG
GACCTGCCCT TCGTCGAGCT CGGCGACAGC GAGAAGCTGC GCGTGGGGGA TGCGGTGGTG
GCCGTCGGCA ACCCGTTCGG GCTGGGCGGC ACCGTGACCT CGGGCATCGT CTCGGCCATG
GGGCGCAACA TCAACTCGGG CCCCTACGAC GACTACATCC AGACCGACGC CGCCATCAAC
CGCGGCAACT CGGGCGGCCC GCTGTTCGAC ACCGAGGGCA AGGTCGTCGG CATGAACACC
GCGATCTTCT CGCCCTCCGG CGGCTCGGTG GGCATCGGCT TCTCGATCCC CGCGAACACG
GTCAAGGATG TCGTGGCCCA GCTTCAGGAC AAGGGTTCGG TCTCGCGCGG CTGGCTCGGG
GTCACGGTTC AGGGCATGAC TCCCGAGATC GCTCAGGCCA TGGGGCTTGA GGGGCGCGAC
GGGGCCCTCG TGGCCGAGGT GCAGCAGGGC AGCCCCGCCG ATGAGGGCGG TCTCGAGAGC
GGCGATGTCA TCACGGCGGT GAACGGGCAG GAACTGACGG AGCGGGCGAG CCTGCCTCGG
CTGATCGCGG CCATCCCGAA CGGCGAGAAA GCCCAACTCA CGGTCCAGCG CGATGGACGC
CAGCAGGAGA TGACCGTGAC GATCGGAGAA CTGACCCCCG ACCGGGCGCA GGTCGCCTCG
GCCGAGTCGC CCGAAGGGCT CGGCGGGCCG CTCGGCATCG AGGTCCAGCC GCTCGAGCCC
GCGCTGGCAC GCCAGCTGGG CCTGCCGGAC GGCGCCTCGG GCATCGTGGT GACGGCGGTC
GATCCGTCGG GGCCGAACGC CGACCGGCTC GCGCCGGGCG ACGTGATCCA GGAAGCGGCC
GGCCACCCGA TCGAGACGCC GCGCGATCTG GCCTCGGCAA TGCGCGAGGC GCGCGGCAAG
GGCGTGATGC TGATGAAGGT GCTGCGGCAG GGCAACCCGG TCTATGTGGG CGCCGAAGTG
GCCTCGTCCT GA
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| Protein sequence | MPMPTPRSSL KAVLIASTLI TAGVAGTALP PTAARAEVPM QGYADLVARV SPAVVFIEVT
AKSKESTPMA GSPFEEFLRR FGEIDPQFRM PQAPEGGQVM HGLGSGFLIS QDGIIVTNNH
VVENATDMKV KLEDGREFKA EVVGTDPMTD IAVIRLKDAK DLPFVELGDS EKLRVGDAVV
AVGNPFGLGG TVTSGIVSAM GRNINSGPYD DYIQTDAAIN RGNSGGPLFD TEGKVVGMNT
AIFSPSGGSV GIGFSIPANT VKDVVAQLQD KGSVSRGWLG VTVQGMTPEI AQAMGLEGRD
GALVAEVQQG SPADEGGLES GDVITAVNGQ ELTERASLPR LIAAIPNGEK AQLTVQRDGR
QQEMTVTIGE LTPDRAQVAS AESPEGLGGP LGIEVQPLEP ALARQLGLPD GASGIVVTAV
DPSGPNADRL APGDVIQEAA GHPIETPRDL ASAMREARGK GVMLMKVLRQ GNPVYVGAEV
ASS
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