| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3977 |
|---|
| Symbol | |
|---|
| ID | 4898814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1117926 |
|---|
| End bp | 1118600 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640114580 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001045827 |
|---|
| Protein GI | 126464714 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TGCTTGCCGA GGACGACCGC CAGACCGCCG ACTACCTCCG CCAGGGTCTT
CTGGCCGAGG GCTACAGCGT GGATCATGTG CCCGACGGGC GCGATGCGCT GGTGCAGGCG
ACGCTGCAAC CCTACGACCT CCTCGTGGTC GACCGGATGA TGCCGGGGCT CGACGGGCTC
TCGCTCGTCA AGGCACTGCG CTCGGCGCAG ATCAAGGCGC CGATCCTGAT CCTGACCGCC
ATGGGCGGCG TGACGGACAG GGTGGAGGGG CTGCAGGCCG GGGCCGACGA TTATCTGGTC
AAGCCCTTCG CCTTCTCGGA ACTGTCGGCG CGGCTGGCGG CGCTGGCCCG CCGTCCCGCC
CTCGCCGAGG GCGCGCGCGA TCTGTTGCGG GTGGGCGATC TCACGCTCGA CACCGTGCGC
CGCACCGTCA GCCGCGGCGG CACCGAGATC GACCTTCAGC CGCGCGAATT CCGGCTTCTC
GAACATCTGA TGCGGGCCGC GGGGCGCGTG CAGACGCGCA CGATGCTGCT CGAAGCGGTC
TGGGATTTCC ATTTCGATCC CGGCACCAGC GTCGTCGAGA CCCACATGAG CCGCCTGCGC
GCCAAGATCG ACCGGCCGTT CGACAAGCCG CTGCTCCACA CGGTCCGGGG CGCGGGCTAC
ATGCTGAAGG CATGA
|
|---|
| Protein sequence | MKILLAEDDR QTADYLRQGL LAEGYSVDHV PDGRDALVQA TLQPYDLLVV DRMMPGLDGL
SLVKALRSAQ IKAPILILTA MGGVTDRVEG LQAGADDYLV KPFAFSELSA RLAALARRPA
LAEGARDLLR VGDLTLDTVR RTVSRGGTEI DLQPREFRLL EHLMRAAGRV QTRTMLLEAV
WDFHFDPGTS VVETHMSRLR AKIDRPFDKP LLHTVRGAGY MLKA
|
|---|
| |