Gene Rsph17029_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3972 
Symbol 
ID4898917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1112517 
End bp1113365 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID640114575 
ProductABC transporter related 
Protein accessionYP_001045822 
Protein GI126464709 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAC TCGAAATCCG CAACCTCTCC GTCAGCTTCG CCACCTCGAC CGGCCGCTTC 
CATGCCGTGC GGGGCATCGA CATGACCGTC AACAGCCGCG AGGTTCTGGC GGTCGTGGGC
GAAAGCGGCT CGGGCAAGTC GGTGGCGATG CTCGCCACCA TGGGGCTCCT GCCCGCCACC
GCCACGGTCG AGGCCGACAT GCTGCGCTTC GACGGCCGCG ACATGCTCAC CATGTCGGAC
GCCGACCGGC GCAAGCTCAT CGGGCGCGAC ATCTCGATGA TCTTCCAGGA GCCGATCGCC
TCGCTGAACC CCTGCTTCAC GGTGGGCTTC CAGCTCGAGG AGGTGTTGCG CGTCCATCTG
GGCCTCGGGG CCCGCGAGCG GCGCGCCCGC GCCATCGAGC TGTTCCAAGC GGTGGGCATC
CCCGATCCCG AGGCGCGGCT CTCATCCTAC CCGCACCAGA TGTCGGGCGG CCAGTGCCAG
CGGGTGATGA TCGCCATCGC CATCGCCTGC CAGCCGAAGC TCCTGATCGC CGACGAGCCC
ACGACCGCGC TCGACGTGAC GATCCAGAAG CAGATCCTCG ACCTGCTGAT GAAGCTGCAG
GAGGATACCG GCATGGGCCT CATCATGATC ACCCACGACA TGGGCGTGGT GGCCGAGACG
GCCGACCGGG TGGTGGTCAT GTACAAGGGC CGCAAGATGG AGGAGGCGGG CGTGCTCGAG
ATCTTCGAGG CGCCGAAACA TCCCTATACG CGGGCGCTCC TGTCGGCGCT GCCGGAGCTT
GCCACCGGCG ACCGGCTGCC CACCGTCTCG GATTTCATCG ACACCGAAGC TCTGGCAGGA
GGCGCGTGA
 
Protein sequence
MALLEIRNLS VSFATSTGRF HAVRGIDMTV NSREVLAVVG ESGSGKSVAM LATMGLLPAT 
ATVEADMLRF DGRDMLTMSD ADRRKLIGRD ISMIFQEPIA SLNPCFTVGF QLEEVLRVHL
GLGARERRAR AIELFQAVGI PDPEARLSSY PHQMSGGQCQ RVMIAIAIAC QPKLLIADEP
TTALDVTIQK QILDLLMKLQ EDTGMGLIMI THDMGVVAET ADRVVVMYKG RKMEEAGVLE
IFEAPKHPYT RALLSALPEL ATGDRLPTVS DFIDTEALAG GA