Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3970 |
Symbol | |
ID | 4898915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 1110595 |
End bp | 1111602 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640114573 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001045820 |
Protein GI | 126464707 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGAT TCCTCCTCGG CAAGCTTGCC TATCTGATAC CGACCTTCCT CGGCATCACC ATCGTGGCCT TCGGCTTCGT GCGGCTCCTG CCGGGCGATC CGGTGCTGCT CCTGGCGGGC GAACGCGGCA TCACGCCCGA GCGTCACGCC GAACTTTCGG CCCAGCTCGG CTTCGACCGA CCCATCTGGG TGCAGTATTT CGACTTCCTC GGAAACCTGT TTCAGGGCGA CTTCGGCCTG TCGCTGACCA CCAAGAAGCC GGTCCTGACC GAGTTCCTGA CGCTGTTTCC GGCGACGGTC GAGCTCGGAC TGGTGGCGGT CACGCTCGCC ACGCTGATCG GCATTCCGCT GGGTGTCTTC GCCGCCATCA AGCGCGGCAG CTGGTTCGAC CAGATCTCGA TGGGCACGGC GCTCGTGGGC TATTCGATGC CGATCTTCTG GTGGGGGCTG CTGCTCATCA TCTTCTTCTC GGGCATCCTG AAATGGACCC CGGTCTCGGG GCGAATCGAC CTGCTCTATT TCTTCCCGAA CGGCACCGGC TTCATGCTGT GGGATTCGCT CGTCTCGGGG CAGAAGGGCG CCTTCCTCTC GGCGGTGCGC CACCTGATCC TGCCCGCCAT CGTGCTGGCC ACGATCCCGA TGGCGGTGAT CGCGCGGCAG TCGCGCTCGG CCATGCTCGA GGTGCTGGGA GAGGACTATG TCCGGACCGC GCGCGCCAAG GGCATGAGCC CCTTCCGCGT GATCTCGGTT CATGCGCTGA GGAACGCGCT GATCCCGGTG GTGACGACCA TCGGCCTGCA GGTCGGCGTG GTGATGGCGG GGGCCATCCT CACCGAGACC ATCTTCTCCT GGCCGGGCAT CGGCAAATGG ATGATCGACT CCATCTCGCG CCGCGACTAT CCGTCGGTGC AGGGCGGCCT GCTGCTCATG GCGGGCGTCG TGATGCTGGT CAACCTGATC GTCGATCTCC TCTACGGGGT CATCAACCCC CGCATCCGTC ATTCGTGA
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Protein sequence | MIRFLLGKLA YLIPTFLGIT IVAFGFVRLL PGDPVLLLAG ERGITPERHA ELSAQLGFDR PIWVQYFDFL GNLFQGDFGL SLTTKKPVLT EFLTLFPATV ELGLVAVTLA TLIGIPLGVF AAIKRGSWFD QISMGTALVG YSMPIFWWGL LLIIFFSGIL KWTPVSGRID LLYFFPNGTG FMLWDSLVSG QKGAFLSAVR HLILPAIVLA TIPMAVIARQ SRSAMLEVLG EDYVRTARAK GMSPFRVISV HALRNALIPV VTTIGLQVGV VMAGAILTET IFSWPGIGKW MIDSISRRDY PSVQGGLLLM AGVVMLVNLI VDLLYGVINP RIRHS
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