Gene Rsph17029_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3949 
Symbol 
ID4899076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1083191 
End bp1083901 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID640114552 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001045799 
Protein GI126464686 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC CCGACGATCT GAGGCTCCGA CTGCTGGCCG GGCTTGGCCT TCTCCTTCTC 
ATCGCGCCGC TGGCCCATCC GGGCCCTGCC GCGGCGGCGG TGGCCGCGGC GCTTGCGCTC
TTCGCCGCCG AGCGGCGGGC GGTGCCCTGG CGCAGGCTCT GGCATCTCGA GGCCTTCCTG
CTCCTCCTCC TCCTGACGCT GCCCTTTACC GTGCCGGGGA CGCCCCTCTG GCAGTGGGGT
CCGCTCCGCC TCAGCGCCGA GGGGCTCGCC CGCACGCTGG TGATCGGGCT GAAGGTCACC
GCCTCGGTCC TGCTGCTCGC GCTGCTTCTC GGCTCGGCCG AGCCCGAGCG GATCGGTGCC
GCGCTGCGGT CGCTCGGGCT GCCCGAGGCG CTTGTGCGGA TCCATCTCGG GCTCGTGCGC
TATCTGGGCC TCATCCGCGA CGAGATGCGG CGTCTGCAGG AGGCGATGCG GCTCCGCGCC
TTCCGGCCGC GGTCGGGCTG GCACAGCTGG CGCAGCTACG GCCATCTGGT GGGCATGATG
CTGGTGCGCG CCCATGCCCG GGCCGAGCGG GTGGAGGAGG CGATGCGGCT CCGTCATGCC
TCGGGCCGGT TCCTGCGGCC CGACCTGCCG CCGCCCGCGC CGCGCGACTG GCGGGGCGGC
GCCCTGCTGC TCGCGCTGGG GGCGGGGCTT CTCTGGTGGG ACCGGACATG A
 
Protein sequence
MILPDDLRLR LLAGLGLLLL IAPLAHPGPA AAAVAAALAL FAAERRAVPW RRLWHLEAFL 
LLLLLTLPFT VPGTPLWQWG PLRLSAEGLA RTLVIGLKVT ASVLLLALLL GSAEPERIGA
ALRSLGLPEA LVRIHLGLVR YLGLIRDEMR RLQEAMRLRA FRPRSGWHSW RSYGHLVGMM
LVRAHARAER VEEAMRLRHA SGRFLRPDLP PPAPRDWRGG ALLLALGAGL LWWDRT