Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3926 |
Symbol | |
ID | 4898794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 1061708 |
End bp | 1062808 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640114529 |
Product | ApbE family lipoprotein |
Protein accession | YP_001045776 |
Protein GI | 126464663 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.166642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACCG TGACCCTCCC GCGCCGGGCC TTCCTTGCTA CCCTCGCCGC CCTCGCACTC GGCGGGGTGG CGGCCCTGCG CCTCGAGCCC GCGTCGGACG TTCGCGAGAC CTTCTATCTC TTCGGCACGC TGGTCGAGAT CGAGACCCAC GGCGTGCCCG AGCGCACGGC CCGCGCCGCC ATCGCCCGCG CGGGCCAGAG CCTTGAGGCC GCGCATCGCG ACTGGCACGC TTGGCGGCCG GGCGAACTCG GGACCTTGAA CGCGGCCATC GCGGCGGGGC GCCCACAGCG CGTGGATGCG ACCCTCGCGG CGCTCCTGCG CAAGGGGCGC GCCCTCTCCT GTGCGAGCGG CGGGCTGTTC GATCCGGCCA TCGGCAGGCT GGTCGGCGCC TGGGGCTTTC ACGCCGACAC ATTGCCCGAG GGCGATCCGC CGTCTGCCGT CGCCATCGCG GCCCTCGTCG CGCGCCACCC GCGCATGACC GACCTGCGCT TCGACGGCAC CGAAGTGCGC TCGCTCAATC CCGCGGTTCA GCTCGATCTC GGGGCCTATG CCAAGGGCGC GGCGCTCGAG ATGGCGGCGG CCGAGCTTCG GGCGGCAGGC GTCGAGGATG CGGTGCTGAA TGCGGGCGGC GGCGTGCAGG TCATCGGCCG GCACGGCGCG CGGCCCTGGC GGGTGGCGAT CCGCGATCCG TTCCAGTGGG GCGTGGTGGC GGGCGTCTCG CTCCGTCCCG GCGAGGCCCT CCATACGTCG GGCAATTACG AGCGCTATTT CGACCGCGGC GGGGTGCGCT TCTCGCACAT CCTCGATCCG CGGACGGGCC GTCCGATGCA GGGCATCGTC TCGGTCTCGG TGCTCGACAC CGACGGGGCG CGGGCCGATG CCGCGGCCAC CGCTCTCTGC ATCGCAGGCC GCGAGGACTG GCCGCGGGTC GCGGCGGCGA TGGGCGTGCG CGCCGTCCTG ATGATCGCGG ACGATGGCGC GGTCTTCGCC ACGCCCGAGA TGATGGCGCG GCTCGAACCG GCGCAGGGCG GCTACCCCGC CCCGGTGCAG ATCGTATCGC TGCCGGAGGA TGTCACACCG CCCTCCTGTC CCGAGGACTG A
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Protein sequence | MRTVTLPRRA FLATLAALAL GGVAALRLEP ASDVRETFYL FGTLVEIETH GVPERTARAA IARAGQSLEA AHRDWHAWRP GELGTLNAAI AAGRPQRVDA TLAALLRKGR ALSCASGGLF DPAIGRLVGA WGFHADTLPE GDPPSAVAIA ALVARHPRMT DLRFDGTEVR SLNPAVQLDL GAYAKGAALE MAAAELRAAG VEDAVLNAGG GVQVIGRHGA RPWRVAIRDP FQWGVVAGVS LRPGEALHTS GNYERYFDRG GVRFSHILDP RTGRPMQGIV SVSVLDTDGA RADAAATALC IAGREDWPRV AAAMGVRAVL MIADDGAVFA TPEMMARLEP AQGGYPAPVQ IVSLPEDVTP PSCPED
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