| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3920 |
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| Symbol | |
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| ID | 4898944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 1054493 |
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| End bp | 1055254 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640114523 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001045770 |
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| Protein GI | 126464657 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0466593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCC GGGATCAGGC GGCGCTCGTC ACCGGCGCGG GATCGGGCTT GGGCGAGGCC
ACGGCGCGGG CGCTGGCGGC GGCGGGGGCG CGGGTGGCGC TCCTCGATTT CAACCTGCCC
GCGGCCGAGG CGGTCGCGGC CGAGATCGGC GGGCTCGCCA TCGGCTGCGA CGTGGCCTCG
GCCGAGAGCG CCGAAGCGGC GGTGGCGCGG GCCGCGGCCG AGCAGGGCGT GGCGCGCATC
CTCGTCAATT GCGCGGGGGT GGCGCCGGCG AAGAAGATGC TCGGGCGCGC GGGCGTCATG
CCGCTCGAGG AGTTCCGCCG CACGGTCGAG GTGAACCTCG TGGGCAGCTT CAACCTTCTG
CGCCTCTTCG CGGCGGGGGC GGCGGAACTC GCGCCGCTCG AGACCGGCGA GCGGGGGGTG
GCGATCCACA CCGCCTCGGT GGCGGCCTGG GAGGGGCAGA TCGGCCAGAC CGCTTATGCC
GCCTCGAAGG GGGGCATCGT GGGCCTCACC CTGCCCGCCG CGCGCGAGCT GGCGCCGCTC
GGCATCCGGG TCTGCGCCAT CGCCCCCGGC ATCTTCGAGA CCGCGATGCT GAAGGGCCTG
CCCGAGGCCG CACAGGAGAG CCTCGGCGCG GCGGTGCCCT TCCCCTCGCG GCTCGGCCGG
CCCGCCGAAT TCGCGGCCCT TGCGCTCCAC ATCCTCTCCA ACCCCATGCT GAACGGCGAG
ACGATCCGGC TCGACGGCGC GCTGCGGATG GCACCGAAAT GA
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| Protein sequence | MDLRDQAALV TGAGSGLGEA TARALAAAGA RVALLDFNLP AAEAVAAEIG GLAIGCDVAS
AESAEAAVAR AAAEQGVARI LVNCAGVAPA KKMLGRAGVM PLEEFRRTVE VNLVGSFNLL
RLFAAGAAEL APLETGERGV AIHTASVAAW EGQIGQTAYA ASKGGIVGLT LPAARELAPL
GIRVCAIAPG IFETAMLKGL PEAAQESLGA AVPFPSRLGR PAEFAALALH ILSNPMLNGE
TIRLDGALRM APK
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