Gene Rsph17029_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3917 
Symbol 
ID4898867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1051369 
End bp1052181 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID640114520 
Producttransglutaminase domain-containing protein 
Protein accessionYP_001045767 
Protein GI126464654 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.193755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAC GGTTCGGCTA CGACATCTCG CTGCAATGCG AGGTCCCGAC GCCGATGATC 
TGCCTTCTCG ACATCCGCGA TGAAGAGCGC GGGGCGCTCC ACACTCCCGA GACCGCGGAG
GCCGATCCTT CGGTGCCGAT GACGGTGCAT CACGACATGT TCGGCAACCG CTGCCGGCGG
CTGGTGGCGC CGGCCGGCAC CCTGCGCCTG ACCGGCGGCG GGGTGATGGA GGATCCAGGC
ACGCCCGATC CCGAGGATTG GGGCGCGGCC GAGATCCCGG TGGCGGAACT GCCCGACGAG
GTGCTGCCGT TCCTCCTCGG CTCGCGTTAC TGCGAGACCG ACCGGATCAG CCAGTTCGCC
TGGGACATGT TCGGACAGGT GACGCCCGGC TGGGCACGGG TGCAGGCGAT CTCGGACTTC
GTCCACGGTC ACATCCGCTT CGACTATGCC GCCGCAAGCT CGTTCCGCAC GGCCTACGGG
GCGTGGGAGG AAGGGACGGG CGTCTGCCGC GACTTCACCC ATCTGGGCAT CGCGCTCTGC
CGCGCGCTGA ACATTCCTGC CCGCTACATC AACGGCTATC TGGGCGACAT CGGCGTGCCT
CCCGGCGGGC CGATGGATTT CTGCGCCTGG ATGGAGGTCT ATCTCGGCGG CCGCTGGCAT
GTGTTCGACC CGCGCAACAA CCAGCGCCGG ATCGGCCGCA TCGTCATCGC GCGCGGCCGG
GATGCGGCGG ACGTGCCGAT GGTCCATTCC TTCGGGCCGC ATCTGCTGAC GAACTTCTTC
GTGCGCTGCG AGGAAGTGGC GGAGGCGGGC TGA
 
Protein sequence
MLIRFGYDIS LQCEVPTPMI CLLDIRDEER GALHTPETAE ADPSVPMTVH HDMFGNRCRR 
LVAPAGTLRL TGGGVMEDPG TPDPEDWGAA EIPVAELPDE VLPFLLGSRY CETDRISQFA
WDMFGQVTPG WARVQAISDF VHGHIRFDYA AASSFRTAYG AWEEGTGVCR DFTHLGIALC
RALNIPARYI NGYLGDIGVP PGGPMDFCAW MEVYLGGRWH VFDPRNNQRR IGRIVIARGR
DAADVPMVHS FGPHLLTNFF VRCEEVAEAG