Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3917 |
Symbol | |
ID | 4898867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 1051369 |
End bp | 1052181 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640114520 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_001045767 |
Protein GI | 126464654 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.193755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATAC GGTTCGGCTA CGACATCTCG CTGCAATGCG AGGTCCCGAC GCCGATGATC TGCCTTCTCG ACATCCGCGA TGAAGAGCGC GGGGCGCTCC ACACTCCCGA GACCGCGGAG GCCGATCCTT CGGTGCCGAT GACGGTGCAT CACGACATGT TCGGCAACCG CTGCCGGCGG CTGGTGGCGC CGGCCGGCAC CCTGCGCCTG ACCGGCGGCG GGGTGATGGA GGATCCAGGC ACGCCCGATC CCGAGGATTG GGGCGCGGCC GAGATCCCGG TGGCGGAACT GCCCGACGAG GTGCTGCCGT TCCTCCTCGG CTCGCGTTAC TGCGAGACCG ACCGGATCAG CCAGTTCGCC TGGGACATGT TCGGACAGGT GACGCCCGGC TGGGCACGGG TGCAGGCGAT CTCGGACTTC GTCCACGGTC ACATCCGCTT CGACTATGCC GCCGCAAGCT CGTTCCGCAC GGCCTACGGG GCGTGGGAGG AAGGGACGGG CGTCTGCCGC GACTTCACCC ATCTGGGCAT CGCGCTCTGC CGCGCGCTGA ACATTCCTGC CCGCTACATC AACGGCTATC TGGGCGACAT CGGCGTGCCT CCCGGCGGGC CGATGGATTT CTGCGCCTGG ATGGAGGTCT ATCTCGGCGG CCGCTGGCAT GTGTTCGACC CGCGCAACAA CCAGCGCCGG ATCGGCCGCA TCGTCATCGC GCGCGGCCGG GATGCGGCGG ACGTGCCGAT GGTCCATTCC TTCGGGCCGC ATCTGCTGAC GAACTTCTTC GTGCGCTGCG AGGAAGTGGC GGAGGCGGGC TGA
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Protein sequence | MLIRFGYDIS LQCEVPTPMI CLLDIRDEER GALHTPETAE ADPSVPMTVH HDMFGNRCRR LVAPAGTLRL TGGGVMEDPG TPDPEDWGAA EIPVAELPDE VLPFLLGSRY CETDRISQFA WDMFGQVTPG WARVQAISDF VHGHIRFDYA AASSFRTAYG AWEEGTGVCR DFTHLGIALC RALNIPARYI NGYLGDIGVP PGGPMDFCAW MEVYLGGRWH VFDPRNNQRR IGRIVIARGR DAADVPMVHS FGPHLLTNFF VRCEEVAEAG
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