Gene Rsph17029_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3913 
Symbol 
ID4898206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1048091 
End bp1048879 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID640114516 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001045763 
Protein GI126464650 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.445364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC TGATGAAGGG TAAACGCGGT CTGGTGATGG GGGTCGCGAA CGACCGTTCG 
ATCGCCTGGG GCATTGCACG TGCCCTGGCC GCCGAAGGGG CCGAACTCGC CTTCTCCTAT
CAGGGCGAGG CGTTCGGCAA GCGGGTCGAG CCGCTGGCGG CCTCGGTCGG CTCGGACTTC
CTCGTCGATG TCGACGTGAT GGACGATGCC TCGCTCGACG CCTGCTTCGG CGCGCTGAAG
GACCGCTGGG GCACGCTCGA CTTCGTGGTC CATGCCATCG CCTATTCGGA CAAGACCGAA
CTCGCCGGAC GCTTCATCAA CACCTCGCGC GAGAACTTCC GCAATTCGCT GACGATCTCG
TGCTATTCCT TCATCGACAT CGCGCGGCGC GCCTCGGAGC TCATGCCCGA CGGCGGCGCG
CTGCTGACGC TGACCTATCA GGGGTCGAAC CGGGTGACGC CCTATTACAA CGTGATGGGC
GTGGCGAAAT CGGCGCTGGA ATCGGCGGTG CGGTATCTCG CCAATGACCT CGGGCCGCAG
AAGATCCGGG TGAATGCGAT CTCGCCCGGC CCGATGAAGA CGCTCGCGGG CGCGGCCATC
GCGGGCGCAC GCGCCACCTT CCGCCACACC GAGGCCAACG CGCCCCTGCG GGCGAACGCG
ACGCTCGAAG CGGTGGGCGG CACGGCGGCT TGGCTCGCCT CGGACTATGG CGCCTGCACC
ACGGGCGAGA TCGTCCGGGT GGACGGCGGC TATCATGTGC TGGGGATGCC GCAGCCCGAC
CATCTCTGA
 
Protein sequence
MADLMKGKRG LVMGVANDRS IAWGIARALA AEGAELAFSY QGEAFGKRVE PLAASVGSDF 
LVDVDVMDDA SLDACFGALK DRWGTLDFVV HAIAYSDKTE LAGRFINTSR ENFRNSLTIS
CYSFIDIARR ASELMPDGGA LLTLTYQGSN RVTPYYNVMG VAKSALESAV RYLANDLGPQ
KIRVNAISPG PMKTLAGAAI AGARATFRHT EANAPLRANA TLEAVGGTAA WLASDYGACT
TGEIVRVDGG YHVLGMPQPD HL