Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3895 |
Symbol | |
ID | 4898851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 1026982 |
End bp | 1028106 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640114499 |
Product | ABC-2 type transporter |
Protein accession | YP_001045746 |
Protein GI | 126464633 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.505485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0804287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGGAC AGAGCCTGAA GAACATCCTG CGGCTGACGG TCAAGGAGCT GCGCGCGATC CGCGGCGACC GGGTGATGAT CGTGCTGATG ATCTATGTCT TCACGGTCGC CACCTGGCTC GTGGCGGGCG CGGCCGACAC CGACATCAAG AACCTCTCGG TGGCGGTGGT GGACGAAGAC CGGAGCCAAC TCTCGGACCG TCTGGCGGGC GCGATCCGCG CGCCGCTCTT CACCCCGCCC GAGCTTCTGA CCGCCGCCGA AGCCGAGGCC GCGCAGAATG CCGGGCGGCA GGTACTGGTC GTCTCGATCC CGCCCGACTT CGAGCGGAGC CTGCGCCGCG GCGATCCGGC CACGCTCCTG ATCCTGATCG ACGCCACCGC GGTCGCGCAG GCGGGCAATG GCGCGAGCTT CCTGCGCCAG CTCCTGCTGG ACGAGATCCA GAGCTACCTC GCCCCCGGCG CGCCCGCCGC TGCGCTCGTC GCGGTGGAGA CGCGAAACCG CTTCAACGAG AACCTGACCG GCAGCTGGTT CACCGCCGTC ATGCAGCTGA TGAATTCGGT GACGATCCTC ACGCTGATCC TCTCGGGCTC CTCGATGATC CGCGAGCGCG AGCACGGCAC CATCGAGCAT GTGCTGGTGA TGCCGGTGCG CCCGCACGAG ATCGTCTTCT CGAAGGTGCT GGCCACGGGC GCGGTGATCC TCGTGGCCTC GGTCCTGAGC CTCGCCTTCG TGATCGAGGG GGCGATGGGG GTGCCGATCG AAGGCTCGCT CGCGCTCTAT GCCGGGGGCG CCGCGCTCTA TGTGGTGGCG GTGGCGAGCC TCGGGCTGAT GCTGGCCTCG TTCACGCAGA ACATGGGCCA GTTCGGCCTG CTGGTGCTGC CCGTCATCAT CGTGATGTTC ATGCTCTCGG GCGGGATCAC GCCGCTCGAG TCGATGCCGG GCTGGTTGCA GGTGGTCATG CGGCTCATCA GCCCCTCGCC GCATTTCGTG GCCTTCGCCC AGTCCGTCCT CTACCGCGGG GCGGGCCTCT CGCTCGTCGT CTGGGAGATG GCCGCGATGG CCGCGATGTC GGTCGTGGCG CTGGCCATCG TTCTCGCGCG CTTTCGCAGG GTGCTGGCGG GCTGA
|
Protein sequence | MGGQSLKNIL RLTVKELRAI RGDRVMIVLM IYVFTVATWL VAGAADTDIK NLSVAVVDED RSQLSDRLAG AIRAPLFTPP ELLTAAEAEA AQNAGRQVLV VSIPPDFERS LRRGDPATLL ILIDATAVAQ AGNGASFLRQ LLLDEIQSYL APGAPAAALV AVETRNRFNE NLTGSWFTAV MQLMNSVTIL TLILSGSSMI REREHGTIEH VLVMPVRPHE IVFSKVLATG AVILVASVLS LAFVIEGAMG VPIEGSLALY AGGAALYVVA VASLGLMLAS FTQNMGQFGL LVLPVIIVMF MLSGGITPLE SMPGWLQVVM RLISPSPHFV AFAQSVLYRG AGLSLVVWEM AAMAAMSVVA LAIVLARFRR VLAG
|
| |