Gene Rsph17029_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3895 
Symbol 
ID4898851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1026982 
End bp1028106 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content69% 
IMG OID640114499 
ProductABC-2 type transporter 
Protein accessionYP_001045746 
Protein GI126464633 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.505485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0804287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGAC AGAGCCTGAA GAACATCCTG CGGCTGACGG TCAAGGAGCT GCGCGCGATC 
CGCGGCGACC GGGTGATGAT CGTGCTGATG ATCTATGTCT TCACGGTCGC CACCTGGCTC
GTGGCGGGCG CGGCCGACAC CGACATCAAG AACCTCTCGG TGGCGGTGGT GGACGAAGAC
CGGAGCCAAC TCTCGGACCG TCTGGCGGGC GCGATCCGCG CGCCGCTCTT CACCCCGCCC
GAGCTTCTGA CCGCCGCCGA AGCCGAGGCC GCGCAGAATG CCGGGCGGCA GGTACTGGTC
GTCTCGATCC CGCCCGACTT CGAGCGGAGC CTGCGCCGCG GCGATCCGGC CACGCTCCTG
ATCCTGATCG ACGCCACCGC GGTCGCGCAG GCGGGCAATG GCGCGAGCTT CCTGCGCCAG
CTCCTGCTGG ACGAGATCCA GAGCTACCTC GCCCCCGGCG CGCCCGCCGC TGCGCTCGTC
GCGGTGGAGA CGCGAAACCG CTTCAACGAG AACCTGACCG GCAGCTGGTT CACCGCCGTC
ATGCAGCTGA TGAATTCGGT GACGATCCTC ACGCTGATCC TCTCGGGCTC CTCGATGATC
CGCGAGCGCG AGCACGGCAC CATCGAGCAT GTGCTGGTGA TGCCGGTGCG CCCGCACGAG
ATCGTCTTCT CGAAGGTGCT GGCCACGGGC GCGGTGATCC TCGTGGCCTC GGTCCTGAGC
CTCGCCTTCG TGATCGAGGG GGCGATGGGG GTGCCGATCG AAGGCTCGCT CGCGCTCTAT
GCCGGGGGCG CCGCGCTCTA TGTGGTGGCG GTGGCGAGCC TCGGGCTGAT GCTGGCCTCG
TTCACGCAGA ACATGGGCCA GTTCGGCCTG CTGGTGCTGC CCGTCATCAT CGTGATGTTC
ATGCTCTCGG GCGGGATCAC GCCGCTCGAG TCGATGCCGG GCTGGTTGCA GGTGGTCATG
CGGCTCATCA GCCCCTCGCC GCATTTCGTG GCCTTCGCCC AGTCCGTCCT CTACCGCGGG
GCGGGCCTCT CGCTCGTCGT CTGGGAGATG GCCGCGATGG CCGCGATGTC GGTCGTGGCG
CTGGCCATCG TTCTCGCGCG CTTTCGCAGG GTGCTGGCGG GCTGA
 
Protein sequence
MGGQSLKNIL RLTVKELRAI RGDRVMIVLM IYVFTVATWL VAGAADTDIK NLSVAVVDED 
RSQLSDRLAG AIRAPLFTPP ELLTAAEAEA AQNAGRQVLV VSIPPDFERS LRRGDPATLL
ILIDATAVAQ AGNGASFLRQ LLLDEIQSYL APGAPAAALV AVETRNRFNE NLTGSWFTAV
MQLMNSVTIL TLILSGSSMI REREHGTIEH VLVMPVRPHE IVFSKVLATG AVILVASVLS
LAFVIEGAMG VPIEGSLALY AGGAALYVVA VASLGLMLAS FTQNMGQFGL LVLPVIIVMF
MLSGGITPLE SMPGWLQVVM RLISPSPHFV AFAQSVLYRG AGLSLVVWEM AAMAAMSVVA
LAIVLARFRR VLAG