| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3891 |
|---|
| Symbol | |
|---|
| ID | 4898335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1022528 |
|---|
| End bp | 1023304 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114495 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001045742 |
|---|
| Protein GI | 126464629 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.524263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0369893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACACA GCGAGCCCTT GCTGTCGGTC CGGGGGGTCA CGATCCAGTA CAAGACCCCC
CAGCATCTGA TCACGGCAAC CTATCGGGTC GATTTCGACG TGCATCAGGG GGATCGCTTC
ATCCTTCTCG GGCCGTCGGG CTGCGGCAAG TCCACGCTGC AGAAGGCGGT GGGCGGCTAT
ATCACGCCCT GCGAGGGCGA GATCCGGCTG AAGGGCCAGA AGGTCAAGGA GCCCGGCCCC
GACCGGATGA TGGTGTTTCA GGAGTTCGAC CAGCTTCTGC CGTGGAAGAC GGTGAAGCAG
AACGTGGCCT TCGCGCTGCA GACCGCGAAA CGGCTCTCGC GTGCCGAGGC CGAAGAGCGG
GCGATGCATT ACGTCTGCAA GGTCGGCCTC GAGAAATTCG CCAACAGCCA TCCCCACATG
CTGTCGGGCG GCATGAAGCA GCGCGTGGCC ATCGCGCGCG GCATGGCGAT GGAGCCCGAC
ATCCTGCTGA TGGACGAGCC CTTCGCGGCT CTCGATGCGC TCACGCGGCG GCGGATGCAG
GACGAGCTGC TGGCCCTCTG GGAGGAGACG CATTTCACCG TCCTCTTCGT CACCCACTCG
ATCGCCGAGG CGATCAAGAT CGGCAACCGC ATCCTGCTGC TCTCGCCCCA CCCCGGCCGG
GTGAAGGCCG AGATCAACAG CACCACCGAC CCCATCGAGG CGGCGCGGCT GGAGAAGCGC
ATCCACGAAA TGCTGTTCGT GAACGAGCCG GACGAGGAGG AGGCCGAGCA TGCTTAA
|
|---|
| Protein sequence | MTHSEPLLSV RGVTIQYKTP QHLITATYRV DFDVHQGDRF ILLGPSGCGK STLQKAVGGY
ITPCEGEIRL KGQKVKEPGP DRMMVFQEFD QLLPWKTVKQ NVAFALQTAK RLSRAEAEER
AMHYVCKVGL EKFANSHPHM LSGGMKQRVA IARGMAMEPD ILLMDEPFAA LDALTRRRMQ
DELLALWEET HFTVLFVTHS IAEAIKIGNR ILLLSPHPGR VKAEINSTTD PIEAARLEKR
IHEMLFVNEP DEEEAEHA
|
|---|
| |