| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3889 |
|---|
| Symbol | |
|---|
| ID | 4898333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1020468 |
|---|
| End bp | 1021475 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640114493 |
|---|
| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_001045740 |
|---|
| Protein GI | 126464627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.475299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.125658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC ACAAGACACT GACGCCCTGG GCGGCGGCGC TTCTGCTCGC CTCGACGGCC
TGGCCCGCGC TGGCCGAGGT TTCGACGGTG CGCCTCGCCA AGCAGTTCGG CATCGGCTAC
CTGCCGCTCA CGCTGGTCGA GGAGCTGGAC CTGCTCGAGA AGCACGCGGC CGCCTCGGGC
CACGAGATCA CGACCGAATG GCTGCGCTTC ACCGGCGGCT CGGGCATGAA CGAGGCGCTG
CTGTCGGGCA ACCTCGATCT GGCGGCGGGC GGCACCGGGC CGCTCTTCAC CATCTGGGCC
CGCACGCGCG AGAACCTGAA GATCAAGGGC GTGGCGGCGC TGGCCTCGAT GCCGCTGCAT
CTGATGACCT CGAACCCCGA GGTGAAGACG CTGGCCGACT TCGGACAGGG CGACAAGATC
GCCCTGCCCG CCGTCAAGAC CTCGATCCAG GCCGTCACGC TGCAGATGGC CTCCAAGCAG
GCCTTCGGGG CGGACAAGGC CACCGCCATG GATGCCTTCA CCGTTTCGAT GGGCCATCCC
GACGCGCAGC TCGCGCTGAC CGGCGGGCAG TCCGAAGTGA CGGCGCATTT CGGCTCGCCG
CCGTTCCAGA ACCTCGAGGC CAAGGTCGAG GGCATCCACA AGGTGCTCGA CAGCTATGAC
GTGCTCGGCG GCTCGCACAC CTTCACCGTG GTCTGGGCGG CCGACAAGTT CATCTCGGAG
AACCCCGAGA TCACCAAGGC CTTCATGGCG GCGCTCGAGG AAAGCATGGA GCTGATCCGC
ACCGACCCCG AGAAGGCGGC CGAGATCTGG ATGGCGGCCG AGCGCAGCCC TCTGAGCCGG
GAAGAGGTCG TGGCGCTGAT CCAGGACGAG CAGACCGTCT GGACCACCAC GCCCGAGCGC
ACCCTGCCCT ATGTCGAGTT CCTGAGCGAG TCCGGCCTCA TCAAGACCTC GGCCGAGGAC
TGGAGCGAGA TCTTCTTCGA CACGATGTCG GGCAAGGAGG GAAGCTGA
|
|---|
| Protein sequence | MKIHKTLTPW AAALLLASTA WPALAEVSTV RLAKQFGIGY LPLTLVEELD LLEKHAAASG
HEITTEWLRF TGGSGMNEAL LSGNLDLAAG GTGPLFTIWA RTRENLKIKG VAALASMPLH
LMTSNPEVKT LADFGQGDKI ALPAVKTSIQ AVTLQMASKQ AFGADKATAM DAFTVSMGHP
DAQLALTGGQ SEVTAHFGSP PFQNLEAKVE GIHKVLDSYD VLGGSHTFTV VWAADKFISE
NPEITKAFMA ALEESMELIR TDPEKAAEIW MAAERSPLSR EEVVALIQDE QTVWTTTPER
TLPYVEFLSE SGLIKTSAED WSEIFFDTMS GKEGS
|
|---|
| |