Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3876 |
Symbol | |
ID | 4898461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 1008307 |
End bp | 1009146 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640114480 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_001045727 |
Protein GI | 126464614 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.901224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGG AGGTGTTCGA TCCCCGCGTC TGCGGCGTGG GCGAGGGGCC GCTCTGGCAT CCCGAGCGGC AGCAGTTCCT CTGGTTCGAC ATCCTCGGAC GGCGCCTGCT GGGTGAGGGA GGTGCGGCCT GGACCTTCGA CCGGGCGGTC ACGGCGGCGG GCTGGATCGA CCGCGACCGG CTGCTCGTCG CCACGGAGAC GGGGCTCGCG GTTCTCGATC TGCAGAGGCG CACGCTCGAC CCGCTGCTGG CGGTCGAGGC GGATCGGCCC GAGACGCGCT CGAACGACGG GCGCGCCGAC CGGCAGGGCG GCTTCTGGTT CGGCACGATG GGCAAGGAAG CCCAGTCCGG GGCGGGCAGC CTCTACCGCT ACCACCGTGG ACGCCTCGAG CGGCTGGTGG AGGGCCTCAC CATCCCCAAC GCGATCTGCT TCTCGCCCGA CGGCCGGACG GCCTATTACT CCGACACGGC GCGGCAGCTG GTCTGGACCC AGCGGCTCGA TGCCGAGGGC TGGCCCGTGG GCGAGCGGGA GCTCTTCCTC GATCTCGCGG ACGAGGGGCT CAATCCCGAT GGGGCGGTGA TCGACGCCGA AGGCGGCTTC TGCTGCGCCG CCTGGGGGGC GGGGGCGGTG CTGCGGTTCG ATGCGCGGGG GCGGCAGACG CACCGGCTTG CCGTCGGCGG GCGGCAACCC TCCTGCCCGG CCTTCGGCGG GCCGGAGTTC GACCGGCTCC TCGTGACGAC GGCGACGGAA GGGATGGAGG ATCCGGGCCC GGGCGAGGGC CTGCCCTACC TCCTGCGGCC GGGTCTCCGC GGACTGGCCG AGCCGCGGGT GACGCTCTGA
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Protein sequence | MSWEVFDPRV CGVGEGPLWH PERQQFLWFD ILGRRLLGEG GAAWTFDRAV TAAGWIDRDR LLVATETGLA VLDLQRRTLD PLLAVEADRP ETRSNDGRAD RQGGFWFGTM GKEAQSGAGS LYRYHRGRLE RLVEGLTIPN AICFSPDGRT AYYSDTARQL VWTQRLDAEG WPVGERELFL DLADEGLNPD GAVIDAEGGF CCAAWGAGAV LRFDARGRQT HRLAVGGRQP SCPAFGGPEF DRLLVTTATE GMEDPGPGEG LPYLLRPGLR GLAEPRVTL
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