Gene Rsph17029_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3876 
Symbol 
ID4898461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1008307 
End bp1009146 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID640114480 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001045727 
Protein GI126464614 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.901224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGG AGGTGTTCGA TCCCCGCGTC TGCGGCGTGG GCGAGGGGCC GCTCTGGCAT 
CCCGAGCGGC AGCAGTTCCT CTGGTTCGAC ATCCTCGGAC GGCGCCTGCT GGGTGAGGGA
GGTGCGGCCT GGACCTTCGA CCGGGCGGTC ACGGCGGCGG GCTGGATCGA CCGCGACCGG
CTGCTCGTCG CCACGGAGAC GGGGCTCGCG GTTCTCGATC TGCAGAGGCG CACGCTCGAC
CCGCTGCTGG CGGTCGAGGC GGATCGGCCC GAGACGCGCT CGAACGACGG GCGCGCCGAC
CGGCAGGGCG GCTTCTGGTT CGGCACGATG GGCAAGGAAG CCCAGTCCGG GGCGGGCAGC
CTCTACCGCT ACCACCGTGG ACGCCTCGAG CGGCTGGTGG AGGGCCTCAC CATCCCCAAC
GCGATCTGCT TCTCGCCCGA CGGCCGGACG GCCTATTACT CCGACACGGC GCGGCAGCTG
GTCTGGACCC AGCGGCTCGA TGCCGAGGGC TGGCCCGTGG GCGAGCGGGA GCTCTTCCTC
GATCTCGCGG ACGAGGGGCT CAATCCCGAT GGGGCGGTGA TCGACGCCGA AGGCGGCTTC
TGCTGCGCCG CCTGGGGGGC GGGGGCGGTG CTGCGGTTCG ATGCGCGGGG GCGGCAGACG
CACCGGCTTG CCGTCGGCGG GCGGCAACCC TCCTGCCCGG CCTTCGGCGG GCCGGAGTTC
GACCGGCTCC TCGTGACGAC GGCGACGGAA GGGATGGAGG ATCCGGGCCC GGGCGAGGGC
CTGCCCTACC TCCTGCGGCC GGGTCTCCGC GGACTGGCCG AGCCGCGGGT GACGCTCTGA
 
Protein sequence
MSWEVFDPRV CGVGEGPLWH PERQQFLWFD ILGRRLLGEG GAAWTFDRAV TAAGWIDRDR 
LLVATETGLA VLDLQRRTLD PLLAVEADRP ETRSNDGRAD RQGGFWFGTM GKEAQSGAGS
LYRYHRGRLE RLVEGLTIPN AICFSPDGRT AYYSDTARQL VWTQRLDAEG WPVGERELFL
DLADEGLNPD GAVIDAEGGF CCAAWGAGAV LRFDARGRQT HRLAVGGRQP SCPAFGGPEF
DRLLVTTATE GMEDPGPGEG LPYLLRPGLR GLAEPRVTL