Gene Rsph17029_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3853 
Symbol 
ID4898567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp982485 
End bp983315 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID640114458 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_001045705 
Protein GI126464592 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA TGCACAAGCT CGACACTCTG AAGGAGCGCC TCGCGCCCTC CGACCGGATG 
CCTGTGGTCT TCCTTGGCCA CGGCAGCCCG ATGAACGCCA TCGAGGACAC CGCCTACAGC
CGCGCCTGGA CAAGGCTCGG CGAGAGCCTG CCGCGGCCTC GCGCCATCCT CGTCGTCTCG
GCGCACTGGA TGACCCGGGG CACGACGCTG GTCGATGTCT CGGCCATGCC GCGGACGATC
CACGATTTCT ACAACTTCCC CGAGGCGCTT CATGCACAAC GCTATCCCGC GCGGGGCGCG
CCGCAGCTGG CGCGCGAAGT GACCTCGCTG CTGGCCAGCC ACCATGCCGC CGAGGATGAC
AGCTGGGGCC TCGACCACGG CGCCTGGACG GTGCTGAAGT TCCTCTATCC CGAGGCCGAC
GTGCCGGTCT TCCAGGTCTC GATCGACATG ACCCGCGACC TCGACCACCA GCTCGAGATC
GGGCGGACAC TGTCCGAGCT GCGCGACCGC GGCGTGCTGA TCCTCGGGTC CGGCAATGTG
GTGCACAACC TGCGCGCGGT GAACTGGAGC GCGGGCAGCA AGCCACATGG GTTCGCGCTG
GAATTCGACG CCCTCTTCGC CGACCGGCTG ACCGAGCGCG ACTTCCGCAT GCTCGCCGAC
CGCAAGGGGC TGGGATCGCT GCTGACGATG GCGCATCCCT CGGTCGATCA CTACATGCCG
GCGCTCACCA TCGCCGGCGC CTCGGACGAG CGCGACGAAC TGACCTTCAT GACGGACGCC
ATCGAGCTCG CCTCGGTCTC GATGCGCTCC TTCGTCTTCC ATGCCCGATA G
 
Protein sequence
MSVMHKLDTL KERLAPSDRM PVVFLGHGSP MNAIEDTAYS RAWTRLGESL PRPRAILVVS 
AHWMTRGTTL VDVSAMPRTI HDFYNFPEAL HAQRYPARGA PQLAREVTSL LASHHAAEDD
SWGLDHGAWT VLKFLYPEAD VPVFQVSIDM TRDLDHQLEI GRTLSELRDR GVLILGSGNV
VHNLRAVNWS AGSKPHGFAL EFDALFADRL TERDFRMLAD RKGLGSLLTM AHPSVDHYMP
ALTIAGASDE RDELTFMTDA IELASVSMRS FVFHAR