Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3853 |
Symbol | |
ID | 4898567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 982485 |
End bp | 983315 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640114458 |
Product | extradiol ring-cleavage dioxygenase III subunit B |
Protein accession | YP_001045705 |
Protein GI | 126464592 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCA TGCACAAGCT CGACACTCTG AAGGAGCGCC TCGCGCCCTC CGACCGGATG CCTGTGGTCT TCCTTGGCCA CGGCAGCCCG ATGAACGCCA TCGAGGACAC CGCCTACAGC CGCGCCTGGA CAAGGCTCGG CGAGAGCCTG CCGCGGCCTC GCGCCATCCT CGTCGTCTCG GCGCACTGGA TGACCCGGGG CACGACGCTG GTCGATGTCT CGGCCATGCC GCGGACGATC CACGATTTCT ACAACTTCCC CGAGGCGCTT CATGCACAAC GCTATCCCGC GCGGGGCGCG CCGCAGCTGG CGCGCGAAGT GACCTCGCTG CTGGCCAGCC ACCATGCCGC CGAGGATGAC AGCTGGGGCC TCGACCACGG CGCCTGGACG GTGCTGAAGT TCCTCTATCC CGAGGCCGAC GTGCCGGTCT TCCAGGTCTC GATCGACATG ACCCGCGACC TCGACCACCA GCTCGAGATC GGGCGGACAC TGTCCGAGCT GCGCGACCGC GGCGTGCTGA TCCTCGGGTC CGGCAATGTG GTGCACAACC TGCGCGCGGT GAACTGGAGC GCGGGCAGCA AGCCACATGG GTTCGCGCTG GAATTCGACG CCCTCTTCGC CGACCGGCTG ACCGAGCGCG ACTTCCGCAT GCTCGCCGAC CGCAAGGGGC TGGGATCGCT GCTGACGATG GCGCATCCCT CGGTCGATCA CTACATGCCG GCGCTCACCA TCGCCGGCGC CTCGGACGAG CGCGACGAAC TGACCTTCAT GACGGACGCC ATCGAGCTCG CCTCGGTCTC GATGCGCTCC TTCGTCTTCC ATGCCCGATA G
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Protein sequence | MSVMHKLDTL KERLAPSDRM PVVFLGHGSP MNAIEDTAYS RAWTRLGESL PRPRAILVVS AHWMTRGTTL VDVSAMPRTI HDFYNFPEAL HAQRYPARGA PQLAREVTSL LASHHAAEDD SWGLDHGAWT VLKFLYPEAD VPVFQVSIDM TRDLDHQLEI GRTLSELRDR GVLILGSGNV VHNLRAVNWS AGSKPHGFAL EFDALFADRL TERDFRMLAD RKGLGSLLTM AHPSVDHYMP ALTIAGASDE RDELTFMTDA IELASVSMRS FVFHAR
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