Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3832 |
Symbol | |
ID | 4898266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 961769 |
End bp | 962407 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640114436 |
Product | cyclase/dehydrase |
Protein accession | YP_001045684 |
Protein GI | 126464571 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.341531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGC ACCGCACCTC TCGGACCGGC CCCGAGCCCC GGACGCTCGC GCTCCTCGCC GGAGCCGGGC TCGCCGCCGG GGCCGCCGTC TGGGCGGTCA GCCGGTCGCG GGAGAACCCT GTCGTCTTCC GCCCGAACGA CGACGCACCC GACCGTGCCG CCCGCCATCC CGAGGCCACC ATGCCCACCG GCCGCACTGT CACCATCAAC CGGCCGCGCT CCGAGCTCTT CGCCTTCTGG CGCGACTTCT CGAACCTGCC GCAGTTCATG GAGAGCGTCG AGCATGTCAC CGTCGTGGGC GACGTGAGCC GCTGGACCCT CGCCGCGCCC TTCGGCCGCA AGATCACGCT CGAGACCCGG ATCGTCGAGG AAGTGCCGGA CCGGCTGATC GCCTGGCGCT CGATGGACGG ATCGGACGTG CGGGCCGAGG GCGCCGTGAC CTTCCGCGAC GCCCCGGCGG GCCGCGGCAC CGAGGTCGAG GCGGTGGTGG CCTATGTCCC CGCGGGCGGC GAGGCCGGGC GGCTGATCGC GCGGCTCTTC CGTCTCGCGC CCGCGATGCA GGGGCGGCGC GAGATGCGCC GCTTCAAGAT GCTGATGGAG GCCGGCGAGA TCGCCACCTC CCGCAACCGG AAGGATTGA
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Protein sequence | MPLHRTSRTG PEPRTLALLA GAGLAAGAAV WAVSRSRENP VVFRPNDDAP DRAARHPEAT MPTGRTVTIN RPRSELFAFW RDFSNLPQFM ESVEHVTVVG DVSRWTLAAP FGRKITLETR IVEEVPDRLI AWRSMDGSDV RAEGAVTFRD APAGRGTEVE AVVAYVPAGG EAGRLIARLF RLAPAMQGRR EMRRFKMLME AGEIATSRNR KD
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