| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3828 |
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| Symbol | |
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| ID | 4898617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 958224 |
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| End bp | 960542 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640114432 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001045680 |
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| Protein GI | 126464567 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.660713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CACGGTCCCT GCAGGACGGT TCGGAGATCC GCCGGACGGG CCAGGCTGCC
CGTTCCAGCC CCTCGACCGG CAGGTCAGCG GCGCCCGTGG GCCGTCAGGA GGTGAGTATG
GACAAGCCCC GTGCGCCTGC CTCGTTCTCG GCGCAGCTTG TCGCGGCCAT TCTGTTCGCC
TGCCTCGTGG CAACGCTGTC GGTGCTCTTT CTGAGTTCCA CGGCGGTGAA CGCGGTCGAT
GCGGATGCCG AGGCCCGACA GATCCGCTTC GCCCAACGCG CCCTCCTGCG CGAGACCCGC
GAGCTTCTCC AGCAGCAGCA GGCTTCGACG GTCTGGGACG AGTCGGTGGT TCATGTCCGC
GCCGGCGACC GCGACTGGAT CGACTCCAAC CTCGGCACCT GGATGCATGA GGAATACGGG
CAGGACGAGA CCTACATCGT CGATCCGGCC TCGCGGATCG TCTATGTCGC GCGCGAGCGG
GTGACCGGGC AGCCCGGCCC CCGGGCGACC CTGCCGCCGG CCGTCGAGGA GATGGTCGAG
GAGATGCGGC CGATGATGCG CGCGGCGACC CGCAACCGGG CAGATTCCAC GGCCGATGTG
GCCGACCTGT CGCTCAGCCG CTTCGTCCTT CTGGGCGGCA AGCCCGCGCT GGTGAGCGTG
GTGCCCATCG TGCCGGACAC GCCCGCGGTG GTGCAGGCGG CGGGCACGGA ATATCTGCAT
GTCGCGGTTC AGATGGCCGA TGCCGACATG GCCGCGCGCT TCTCGAGCAC CTATGAGTTC
GACCGCGGCT CTTTCTCGGT TCAGCCCGGA CCCGAAGACC GACTCTCCGT GCCGCTGCGC
GACGGGGCGG GGCGGCCCAT CGCCTGGTTC GTCTGGCGGG CGGACCGCCC CGGGCACCGG
ATCGTCGATG AGATGCTGCC CGTGGTGGGC CTGTTCGCGG CCTTCGGCGC CGCCCTTCTG
ACCTGGCTCC TGCGCACGCT CTGGACCGCG TCGCGGCGGC TGCACCAGAG CGAGGAGGAA
GCGCGCTATC TGGCGATGCA CGATCCGCTG GCGGGCATCC CCAACCGCAC GCTGTTCGAG
GACCGGCTGG ATCAGGCGCT CAAGGCCGAA CGACGCGGGG GCCCGCCGGT GGCCCTGCTC
TGCCTCGACC TCGACCGGTT CAAGGCGGTC AACGACACGA TGGGCCATCA GGCCGGCGAC
GAGCTCATCC GGCAGATGGC GGCGCGGCTG CGGTCGCATG TCCGCGAGAC GGACACGGTG
GCGCGGCTCG GCGGCGACGA GTTCGGCGTG ATCCTGATCG GGATGGCCAG CGACGAGACG
CTCGGGCGCT ACTGCAGCGG CCTCGTGCAT CTGCTGGCGG CCCCCTGCGA CCTCAAGTGC
GGGCAGGTCC AGATCGGCGC GAGCATCGGC GCCGTGCGCG CGGCCAGCGT GGACGGCGGC
AGGGAGGCCA TCCTGCGCAG CGCCGACACG GCTCTCTACC GTGCGAAGGC CGAGGGGCGC
GGACGCTACT GCATCGCCAC GCCCGAGATG AACGACATCT TCCGCCGCCG CCACGAGATC
GAGCGCGACC TGCGCGAGGC CGTCGCCGAG GGCGGGCAGA TCCATGTGCT CTACCAGCCC
ATCTTCGATG CCGAGGAACG CATCGTGGCC GCCGAGGCGC TGGTGCGCTG GAACCACCCG
ATCCTCGGGC AGATGGGCCC GGAGACCTTC CTCTCCATCG CCGAGGAGAC CGGCCTGATC
GATCGGATCG GCCACCATGT CCTCGAACAG GCCTGCATCC TTGCCGCCAC CTCGGGCATT
CCGCGGGTCT CGGTCAATGT CTCGCCGGTG CAGCTGCGCC AGGAGACCTT CGCCGACGAG
GTTCTGGCGG TGATGGCGGC GCATTCCCTG TCGGGCGAAC GGCTCGTGCT GGAACTGACC
GAGAAATTCA CGCTCGACGC GGGCCCTGCG ACGCTGGCCA ATCTGGCCCG CCTGCGCGCG
GCGGGGGTCT CGATCGCGCT CGACGATTTC GCGACCGGCC AGTCGCTCCT GCGCTATGTG
CGCGACTATC AGATCGACAC GATCAAGATC GACCGCTCCT ATGTGGCGCG GCTCGGCACC
GGCGACGGCA CCGACCAGAT CGTGCGCGCC ATCCTCGACC TCGGCCGCGC CATGGGCATC
GAGGTCACGG CCGAGGGGGT CGAGCGCGCG TCCCAGCGCG AGGCGCTTCT CGGCATGGGC
TGCCACGGCT TTCAGGGCTA TCTGCTCGGT CGGCCGATGG ATCCGCTGCG GCTCGCGGCG
CTGAGCGCGC GCAAGGGCGT CGCGCAGAAG AGCGCCTGA
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| Protein sequence | MNAARSLQDG SEIRRTGQAA RSSPSTGRSA APVGRQEVSM DKPRAPASFS AQLVAAILFA
CLVATLSVLF LSSTAVNAVD ADAEARQIRF AQRALLRETR ELLQQQQAST VWDESVVHVR
AGDRDWIDSN LGTWMHEEYG QDETYIVDPA SRIVYVARER VTGQPGPRAT LPPAVEEMVE
EMRPMMRAAT RNRADSTADV ADLSLSRFVL LGGKPALVSV VPIVPDTPAV VQAAGTEYLH
VAVQMADADM AARFSSTYEF DRGSFSVQPG PEDRLSVPLR DGAGRPIAWF VWRADRPGHR
IVDEMLPVVG LFAAFGAALL TWLLRTLWTA SRRLHQSEEE ARYLAMHDPL AGIPNRTLFE
DRLDQALKAE RRGGPPVALL CLDLDRFKAV NDTMGHQAGD ELIRQMAARL RSHVRETDTV
ARLGGDEFGV ILIGMASDET LGRYCSGLVH LLAAPCDLKC GQVQIGASIG AVRAASVDGG
REAILRSADT ALYRAKAEGR GRYCIATPEM NDIFRRRHEI ERDLREAVAE GGQIHVLYQP
IFDAEERIVA AEALVRWNHP ILGQMGPETF LSIAEETGLI DRIGHHVLEQ ACILAATSGI
PRVSVNVSPV QLRQETFADE VLAVMAAHSL SGERLVLELT EKFTLDAGPA TLANLARLRA
AGVSIALDDF ATGQSLLRYV RDYQIDTIKI DRSYVARLGT GDGTDQIVRA ILDLGRAMGI
EVTAEGVERA SQREALLGMG CHGFQGYLLG RPMDPLRLAA LSARKGVAQK SA
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