Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3820 |
Symbol | |
ID | 4898586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 951540 |
End bp | 952253 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114424 |
Product | hypothetical protein |
Protein accession | YP_001045672 |
Protein GI | 126464559 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.562696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.246565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCG CCCCTCACGG CCGCAGCGCC GGTTTCGCGC GCTCCACCGC TGTCTATGAC GACGGCCTGC GCGCGCATAT GCTGCGCATC TACAACTACA TGGGCCTCGG GCTCGCGCTG ACGGGCCTCG TGGCCGTCCT CGTCGCGGCC ACCCCGGCCA TCTATGTGCC GATCTTCTCG ACCCCGCTGA AATGGGTCGT GATGCTGGCG CCGCTCGCCT TCGTCCTGTT CCTGTCCTTC CGCATCGAGG CCATCTCGGC GGGCACCGCG CAGATGCTCT TCTGGGCCTT CTGCGGTGTC ATGGGCCTGT CGCTCGCCTC GATCTTCCTC GTCTTCACCG GCACCTCGAT CGCGCGCGCC TTCTTCGGGG CGGCGGCCAT GTTCGCCGGC ATGAGCCTCT ACGGCTACAC GACCAAGCGC GACCTGAGCC AGTTCGGCAG CTTCCTGATG ATGGGCCTGA TCGGCGTCAT CCTGGCCAGC GTCATCAACC TCTTCCTCGG CTCGTCCGCG CTGCAGTTCG CGATCTCGAT CATCGGCATC CTCGTCTTCG TCGGTCTGAC GGCCTGGGAC ACGCAGGCGA TCAAGCTGCA ATATGCCGAG CATCAGGACA GCGAGACCTC GCAGAAGCTC GCCGTCATGG GGGCCCTGTC GCTCTATCTG AACTTCATCA ACATCTTCCA GCTCCTGCTC TCGCTGACGG GCGAGCGCGA GTAA
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Protein sequence | MNPAPHGRSA GFARSTAVYD DGLRAHMLRI YNYMGLGLAL TGLVAVLVAA TPAIYVPIFS TPLKWVVMLA PLAFVLFLSF RIEAISAGTA QMLFWAFCGV MGLSLASIFL VFTGTSIARA FFGAAAMFAG MSLYGYTTKR DLSQFGSFLM MGLIGVILAS VINLFLGSSA LQFAISIIGI LVFVGLTAWD TQAIKLQYAE HQDSETSQKL AVMGALSLYL NFINIFQLLL SLTGERE
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