Gene Rsph17029_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3820 
Symbol 
ID4898586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp951540 
End bp952253 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID640114424 
Producthypothetical protein 
Protein accessionYP_001045672 
Protein GI126464559 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.562696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.246565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG CCCCTCACGG CCGCAGCGCC GGTTTCGCGC GCTCCACCGC TGTCTATGAC 
GACGGCCTGC GCGCGCATAT GCTGCGCATC TACAACTACA TGGGCCTCGG GCTCGCGCTG
ACGGGCCTCG TGGCCGTCCT CGTCGCGGCC ACCCCGGCCA TCTATGTGCC GATCTTCTCG
ACCCCGCTGA AATGGGTCGT GATGCTGGCG CCGCTCGCCT TCGTCCTGTT CCTGTCCTTC
CGCATCGAGG CCATCTCGGC GGGCACCGCG CAGATGCTCT TCTGGGCCTT CTGCGGTGTC
ATGGGCCTGT CGCTCGCCTC GATCTTCCTC GTCTTCACCG GCACCTCGAT CGCGCGCGCC
TTCTTCGGGG CGGCGGCCAT GTTCGCCGGC ATGAGCCTCT ACGGCTACAC GACCAAGCGC
GACCTGAGCC AGTTCGGCAG CTTCCTGATG ATGGGCCTGA TCGGCGTCAT CCTGGCCAGC
GTCATCAACC TCTTCCTCGG CTCGTCCGCG CTGCAGTTCG CGATCTCGAT CATCGGCATC
CTCGTCTTCG TCGGTCTGAC GGCCTGGGAC ACGCAGGCGA TCAAGCTGCA ATATGCCGAG
CATCAGGACA GCGAGACCTC GCAGAAGCTC GCCGTCATGG GGGCCCTGTC GCTCTATCTG
AACTTCATCA ACATCTTCCA GCTCCTGCTC TCGCTGACGG GCGAGCGCGA GTAA
 
Protein sequence
MNPAPHGRSA GFARSTAVYD DGLRAHMLRI YNYMGLGLAL TGLVAVLVAA TPAIYVPIFS 
TPLKWVVMLA PLAFVLFLSF RIEAISAGTA QMLFWAFCGV MGLSLASIFL VFTGTSIARA
FFGAAAMFAG MSLYGYTTKR DLSQFGSFLM MGLIGVILAS VINLFLGSSA LQFAISIIGI
LVFVGLTAWD TQAIKLQYAE HQDSETSQKL AVMGALSLYL NFINIFQLLL SLTGERE