Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3795 |
Symbol | |
ID | 4899094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 922653 |
End bp | 923375 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640114399 |
Product | hypothetical protein |
Protein accession | YP_001045647 |
Protein GI | 126464534 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.085145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.591009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG AGGCCGCGCC CCGGCGGGCC ATCTGGGCCA TGCTGATCCT GCAGGTGGGC ATCGGGGCCG CGCTGATCGG CATGGATCTG GCGCGCCCCG CGCCGCCCTC GCCGGCCGAT CTCTTCGCGC CGGCGAGCGT GCCGCAGATG CGGCCCTACC GCCCCGATCT GCGCCCTGCG CCCGGCACCG ACGGGCCGCA GATGCGCCCC ATGCCCGCCC GGCTCGAATT CGGCGGCGAG GGCGCGCGCG TCACCCTCAC GGGGCAGATC GCGGCGGGGG ATGCGGCGCG CTTTTCGGCC CTTCTGGAGC AGCGGGGCGA GCGGCCCGAG GTGGTGGGGC TCGACAGTTC GGGCGGCGTC GTGTCCGAGG CCCTGCTGAT CGGCCGCCAG ATCCGCGCGC TCGGGGCCGC GACCGAGGTG GAGGCGGGCG CCGTCTGCCT CTCGGCCTGC CCCTACCTCC TCGCAGGCGG GGTCGAGCGG CGGGTGGCCG AGGGCGGGCT CGTGGGTGTC CATCAGCATT ACTTCGGCGA GAACAGCCTC TTGCCCGCCT TTCTTGCCGT GGAGGATGTG CAGCGCGGGC AGGCCGAGGT CATGCGCTAT CTCGACGAAA TGGGCGTGGA CCCGCGCCTG ATGATGCACG GCATGGAGAC GCCCGCGCGC GAGATCTACA TGCTCGACGC CGCCCGTCTG GCCGAGTTGC GGCTGTCAAC CGAAGGCGGG TGA
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Protein sequence | MSAEAAPRRA IWAMLILQVG IGAALIGMDL ARPAPPSPAD LFAPASVPQM RPYRPDLRPA PGTDGPQMRP MPARLEFGGE GARVTLTGQI AAGDAARFSA LLEQRGERPE VVGLDSSGGV VSEALLIGRQ IRALGAATEV EAGAVCLSAC PYLLAGGVER RVAEGGLVGV HQHYFGENSL LPAFLAVEDV QRGQAEVMRY LDEMGVDPRL MMHGMETPAR EIYMLDAARL AELRLSTEGG
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