| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3790 |
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| Symbol | |
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| ID | 4899008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 916883 |
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| End bp | 917578 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640114394 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001045642 |
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| Protein GI | 126464529 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.403656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG TCATCGCCAT CACCGGCACG CGCAAGGGCA TCGGCCGCGC GCTGGCCGAG
ACCTATCTCG CGCGCGGCTG GACCGTCGTC GGCTGCTCGC GCGATGCCAG CGACCTCACG
CACCCGGCCT ATCGCCACTA CACGCTCGAC GTGGCCGACG AGCGGGCGGT CGCGGGCATG
ATGCAGGATG TGCGCCGGAC GCACGGGCGG CTCGACGCGC TTCTGAACAA TGCCGGCATC
GCCTCGATGA ACCATGCGCT GCTGACCCCC GGCAGCACGG TCGAGCGGGT GTTCGCGACC
AATGTCTTCG GCACCTTCCT GTTCTGCCGC GAGGCCGCCA AGCTGATGGG CCGCCGCCGC
ACCGGCCGGA TCGTGAACTT CGCCACCGTG GCCACGCCGC TCAAGCTCGA GGGCGAGGCG
GTCTATGCCG CCTCCAAGGC CGCGGTCGTG TCGCTGACCG AGGTGCTGGC GCGCGAGCTG
GCGCCCATGG GCATCACCGT CAATGCCGTG GGGCCGACCC CGGTGCCCAC CGACCTCGTC
GGCGCCGTGC CCGAGGAGAA GATGCGCGCG CTGATCGCTC GGCAGGCCAT TCCGCGGTAC
GGCAGGATGG AGGATGTGCT CAACGTCTGC GACTTCTTCC TGCGCGACGA ATCCGATTTC
GTGACCGGCC AGACGATCTA TCTCGGAGGG GTCTGA
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| Protein sequence | MSRVIAITGT RKGIGRALAE TYLARGWTVV GCSRDASDLT HPAYRHYTLD VADERAVAGM
MQDVRRTHGR LDALLNNAGI ASMNHALLTP GSTVERVFAT NVFGTFLFCR EAAKLMGRRR
TGRIVNFATV ATPLKLEGEA VYAASKAAVV SLTEVLAREL APMGITVNAV GPTPVPTDLV
GAVPEEKMRA LIARQAIPRY GRMEDVLNVC DFFLRDESDF VTGQTIYLGG V
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