| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3767 |
|---|
| Symbol | |
|---|
| ID | 4898861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 888799 |
|---|
| End bp | 889956 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640114372 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001045620 |
|---|
| Protein GI | 126464507 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC ACCGTGACCA CATCCCGGCG AAAGAGTTTC TTCAGCGGCT GGAAAGCTAC
CGCAAGGGCT CGATCTCGCG CCGGCACTTC CTGAACGTGA CCGGCCTCGG CGCCGCGACC
ATGGCAATGG CGGGTGCGAT GCCGGGCTTC GCCCGCCGCG CGCAGGCCCA GGGCGCGATC
GGCGACCGCG TCGTCATCGC CACCTGGCCG AACTACCACG ACCCGGCCGA CCTCGACGCC
TTCCGGGCCG CCACCGGCGC CGCGGTCGAC GTCAACGTCT TCGGCTCCAA CGAGGAGATG
CTCGCGAAGC TGCAGGCGGG CGGCACGGGT TGGGACGTGG TGGTGGCCAC GAACTACACG
ATCTCGACCT ATGTCGAGGC GGGAATCATC GAGGAGCTCG ACCTGTCGCG CATCCCGAAT
TTCGACAGGG CTTCGACCGA CGCGCGCTTC GCCGATCCGG GCGTCATCGA CGGCAAGACC
TACGCCATCC CGCGCAACAT CGGCACGACC GGCTATTGCA TCAATACCGC CGAGATCGAC
GGCGAGACGC CGACCACCTG GAAGGAATTC TGGGATCTGG CGCGCGACCG GCTGTCGGGA
CGCGGCATGG TGCATGACTA TCAGCTGACC GCCATCGGCA ACGCACTGAA ATACTACGGC
TATTCCTTCA ACTCGGTCGA TCCGGCGGAA CTCGCGAAGG CGGAGGAGCT GCTGATCGAC
GCCAAGCCGC ATCTCTTCGC GATTACCTCG GACTACCAGC CCTCGATGCG TTCCGGCGAT
GCGGCGCTGT CGATGTGCTG GACCGGCGAC GCGGTGCAGC TGCAGCGCGA CATCCCCGAG
ATTGCCTACG TGCTCGGCCG CGAGGGCGGC GAGCTCTGGT CGGACTTCTT CACCATCCCC
GCCTCGGCCC CGCACAAGGA TGCGGCCTAT GCGCTGATCG ACTTCCTGCT CGAGCCGAAG
ATGGCCGCGC AGGAGGCCAT GTTCCACGGC TATCCGACCG GAGACGCCCG GGTCGACGCG
ATGCTGCCCG CCGAGATGCG CGACAGCCCG ATCCTGTTCC CGGCTGCGGA TCTCCTGAAT
GCGCTCGAGT TCGGCGCCGC CGTCACCCTG ACCAACCCGG ACCGCGCCGA GGTCATGGCG
CGCTTCAAAT CGGCATAA
|
|---|
| Protein sequence | MTQHRDHIPA KEFLQRLESY RKGSISRRHF LNVTGLGAAT MAMAGAMPGF ARRAQAQGAI
GDRVVIATWP NYHDPADLDA FRAATGAAVD VNVFGSNEEM LAKLQAGGTG WDVVVATNYT
ISTYVEAGII EELDLSRIPN FDRASTDARF ADPGVIDGKT YAIPRNIGTT GYCINTAEID
GETPTTWKEF WDLARDRLSG RGMVHDYQLT AIGNALKYYG YSFNSVDPAE LAKAEELLID
AKPHLFAITS DYQPSMRSGD AALSMCWTGD AVQLQRDIPE IAYVLGREGG ELWSDFFTIP
ASAPHKDAAY ALIDFLLEPK MAAQEAMFHG YPTGDARVDA MLPAEMRDSP ILFPAADLLN
ALEFGAAVTL TNPDRAEVMA RFKSA
|
|---|
| |