Gene Rsph17029_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3740 
Symbol 
ID4898929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp860933 
End bp861685 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID640114346 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001045594 
Protein GI126464481 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCG ATCGCACCGG TTTCCGTGCC CGCCTGCGGG CGCCCGAGCC GATCCTCGGC 
ACCTTCCTGA AGATCCCCTC GACCCAACCG GCCGAGATCC TCGCCACGCT CGGCTTCGAC
TTCGTCGTGA TCGACGAGGA ACATGCCCCC TTCAACCCGG AAACCACCGA TGCGATCCTG
CTGGCCTGTC GCGCACACGG GATGGCCGGG CTGGTGCGCG TGCGCCAACC GGCCGACATT
CTGCGGGTGC TCGACTGCGG GGCGGATGGG GTGCTCGTGC CGCATGTGGC ATCGCCCGAG
GCCGCCCGCG AGGCCGTCGC CCTCGCGCGA TACAGCGGAG CGCGCGGCCT GTCGCCCGCG
ACCCGTGCCG GCGCGTTCGG CGCGACGGAT GTCGCGCAGC ACATGACACG GCAGGATCGA
CGCTGTGCCG TCATCGCGAT GATGGAGGAC ATGGAGTGCC TCGACAGGCT CGATGGGATC
CTTGCCACCG ACGGACTGGA CGCGATCTTC ATCGGACGGG CGGATCTCGC CGCCAGCATG
GGACCGGCAG CCGCAGACGG AGGGATAGAG CGCGCGGTGG ATCTTGTCCT CGCCAGCGCA
CGGGATGCCG GGATGCCTGC TCTTGTCCTC ACCTCCAACC GCAGCGAGGC GGAGGAGTTT
CGATCCAGAG GCGCGACCGG CTTCCTGAGC ATGTCGGACC AGGGCTTCCT TCGAGAACAG
GCCGCCCGTA TCCGCGCCAT CTTTTCGGGA TAG
 
Protein sequence
MPGDRTGFRA RLRAPEPILG TFLKIPSTQP AEILATLGFD FVVIDEEHAP FNPETTDAIL 
LACRAHGMAG LVRVRQPADI LRVLDCGADG VLVPHVASPE AAREAVALAR YSGARGLSPA
TRAGAFGATD VAQHMTRQDR RCAVIAMMED MECLDRLDGI LATDGLDAIF IGRADLAASM
GPAAADGGIE RAVDLVLASA RDAGMPALVL TSNRSEAEEF RSRGATGFLS MSDQGFLREQ
AARIRAIFSG