Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3740 |
Symbol | |
ID | 4898929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 860933 |
End bp | 861685 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640114346 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_001045594 |
Protein GI | 126464481 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGGCG ATCGCACCGG TTTCCGTGCC CGCCTGCGGG CGCCCGAGCC GATCCTCGGC ACCTTCCTGA AGATCCCCTC GACCCAACCG GCCGAGATCC TCGCCACGCT CGGCTTCGAC TTCGTCGTGA TCGACGAGGA ACATGCCCCC TTCAACCCGG AAACCACCGA TGCGATCCTG CTGGCCTGTC GCGCACACGG GATGGCCGGG CTGGTGCGCG TGCGCCAACC GGCCGACATT CTGCGGGTGC TCGACTGCGG GGCGGATGGG GTGCTCGTGC CGCATGTGGC ATCGCCCGAG GCCGCCCGCG AGGCCGTCGC CCTCGCGCGA TACAGCGGAG CGCGCGGCCT GTCGCCCGCG ACCCGTGCCG GCGCGTTCGG CGCGACGGAT GTCGCGCAGC ACATGACACG GCAGGATCGA CGCTGTGCCG TCATCGCGAT GATGGAGGAC ATGGAGTGCC TCGACAGGCT CGATGGGATC CTTGCCACCG ACGGACTGGA CGCGATCTTC ATCGGACGGG CGGATCTCGC CGCCAGCATG GGACCGGCAG CCGCAGACGG AGGGATAGAG CGCGCGGTGG ATCTTGTCCT CGCCAGCGCA CGGGATGCCG GGATGCCTGC TCTTGTCCTC ACCTCCAACC GCAGCGAGGC GGAGGAGTTT CGATCCAGAG GCGCGACCGG CTTCCTGAGC ATGTCGGACC AGGGCTTCCT TCGAGAACAG GCCGCCCGTA TCCGCGCCAT CTTTTCGGGA TAG
|
Protein sequence | MPGDRTGFRA RLRAPEPILG TFLKIPSTQP AEILATLGFD FVVIDEEHAP FNPETTDAIL LACRAHGMAG LVRVRQPADI LRVLDCGADG VLVPHVASPE AAREAVALAR YSGARGLSPA TRAGAFGATD VAQHMTRQDR RCAVIAMMED MECLDRLDGI LATDGLDAIF IGRADLAASM GPAAADGGIE RAVDLVLASA RDAGMPALVL TSNRSEAEEF RSRGATGFLS MSDQGFLREQ AARIRAIFSG
|
| |