| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3708 |
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| Symbol | |
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| ID | 4898857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 824783 |
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| End bp | 825436 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114321 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001045569 |
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| Protein GI | 126464456 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.325747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCT TGATCGTGGG GGCCTCCGGC GGGATTGGCG CCGCCTTGCT CAAGGCCTGT
GGCGACGGTT CGGTGGGTGT TTCGCGCCGA ACGGACGGAC TAGACGTTAC CGACGAGGCG
TCCATCGCCC GGACCCTCGG CACGCTGGAG CCGCACTTCG ATCGCGTGAT TGTCGCCACC
GGCGCCCTCG AGATCGGCGG CATCGCCCCC GAGAAGAGTC TTCGAGCGAT CGACGGCTCC
AACCTAGCCC GACATTTCGC ATTGAACGCG ATGGGACCGG TACTGGTGCT GAAGCACGCG
CTGCGTCTGC TGCCGCGCGA CCGGCCGGCG CACTTTGCAG CGCTCTCTGC ACGCGTCGGG
TCAATCGGCG ACAACCAGCT GGGCGGATGG TTCGCATACC GCGCCGCGAA GGCCGCGCTG
AACCAGTTGC TCCACACGGC GGCGATCGAG GTCGCGCGCA CCCATCCGCA GGCCGTGGTG
GTGGTGCTGC ATCCGGGAAC GGTTGAGACA GGTTTGAGCG GGCGCTTCCG GGGCACGCGT
GCCGCGGTGA CGCCGCAGGT TGCGGCGGAA AATTTGCTCT CCACGCTCGA CCGGCTCGCC
CCGTCAGAAT CGAGCGGGTT CTTCGATGCC ACCGGCGCAC GGATCCCCTG GTGA
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| Protein sequence | MRSLIVGASG GIGAALLKAC GDGSVGVSRR TDGLDVTDEA SIARTLGTLE PHFDRVIVAT
GALEIGGIAP EKSLRAIDGS NLARHFALNA MGPVLVLKHA LRLLPRDRPA HFAALSARVG
SIGDNQLGGW FAYRAAKAAL NQLLHTAAIE VARTHPQAVV VVLHPGTVET GLSGRFRGTR
AAVTPQVAAE NLLSTLDRLA PSESSGFFDA TGARIPW
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