| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3692 |
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| Symbol | |
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| ID | 4898338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 801005 |
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| End bp | 803215 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640114300 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_001045554 |
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| Protein GI | 126464441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.306041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGG CTCAGAAAGT CGCGTTGGCG CTTCGGTCGC AGCCGACGCC GATCCCGCTG
CCGGTGCCCG CGCCGGCCCA GGAGGAATGG CTGGACGTTC AGGCGCTGTT CCGCATCATC
CGCCGCAGGC TGCCGGTGGC GGCCCTCGTC TTCGTGGGGC TGATGGCCCT GCTGACGGGA
CCGATCCTCG ACATGAAGCG CAGCTTCACC GCGCAGGCGC GGGTGCTGAT GCGCGATCCG
CCGAGCGCGG GCCTCGGGGC CGTCGACGGG GCCGAGCAGA AGCCGCTGAA CCTCAGCACC
GAGATCGAGC GCTTCGTGTC GCGCGACATC AGCGCCGAGG TCATCCGCGA GGTCGGCCTC
GACAAGCTGC CGGAATTCAA CGCGGCCCTG CGCGAGCCCT CGCTGTCCCG GCAGGCGATC
AATGCCGTGC GGAGCTGGTT CGACGCCGAT CCGCCCGTTC GTGCGACCCG GCGCGACGAC
CTGCGGCTCG TCATCCCGGC CTACATGGCC CGGCTCACGG TGTTCCAGAA GGGCAACTCC
GACGTCGTCA ACATCGGCTT CAGCTCCGAG GATGCGTCGA TTGCCGCGGC GGTGCCGAAC
GCGGTCATCC GCACCTACCT GAAGGCGCGC GAGCGCCAGC ATCAGGGCGA GCTGGAGGCC
AACCTGCGCT GGCTCGCGGT GCGGATCGAA GAGCAGAGCC AGCGGCTCAA TGCGGCGCTC
GAGGCCGTGG CCACCCGGCG GAACCAGCCC GACCTCTCCT CGCCGAGCGC CCTCGGCATC
GACACCGCCA TCGCGAGCCT CAGCGAACGG CGCATCGCCA TCCGCCACGA CATCGGAGCG
GCAGAGCGCA GCCTCGAGGA TCTGAAGGCC GACGGCGTGG TGGTCGGCCA ATCCGGCGAC
AGCGGGCCCG AGGCCAAGCC GCAGCTCGGC ATCCAGCTCG AGGCCGCGCG GGCCGAGCTG
GAGCGGCTCC AGACCCAGTT CGGCGAGAAC CATTCGAAGG TCCGCGACGT CCGCGAGCGG
ATCGCCGAGA TCGAGAGCCA GATGCGCTTC GAGGTCTCGT CCGAGATCCT GGCCCTCACG
CGGCGCATCT CGTCGCTGAA GGCGGAGGAG GCCGCGAACC TCGAAGAGCT CGAGAGGGCG
CGCGACACGC TCGCCCGGCA GAAGGAGGCG CAGGCCGAGC TCGCCCGCCT CGAGAACGAG
GCGAGCCAGG AACAGCTTGC GCTGGCGGCG GCGCTGCAGC AGCAGCGGCT CCTCCTCTCC
AGCTCGCGGC AGAACGTGAC GGAGGTGTCG GTGCTGACGC CCGCCTCGGT GCCGCTGAAC
GCGGACGGGC GCGGCAAAGC CTTCTACCTC GTCGCCGCCA TGATCGGCAG CGCCATCGCG
GCGGTGACGG CCGTATTCGC GCTCGAAATC CTCGACACCA AGGTCCGCAG CGCCGAGCAT
CTGCGCCGCA TCCGCCGCGT GGTGCCGACG GGGATCGTGC CGCAGCTGCC CCGCAGCCGC
GGCGCGCCGA CCGGCCCGCT CGGGTGGTGG CAGCCCGAAG GCGTGTTTGC CGATGCGGTC
CGGGCGGTGG TCATCAGCCT CAGTCACGCC CGGCGGCAGC ATCTGGGCAA CATCCTCGTG
AGTTCCGCCC TGCCGGGCGA GGGCAAGACC ACCGTCGCCG CCGCCCTCGC GGCCGAGATG
GCGGCCTCGG GCCAGAAGGT CCTGCTGGTG GATGCGGATC TGCGGCAGGG CAACATGCAT
CGGCTCTTCG GGCTGGAGCC GGGGTTCGGC CTCTCGGATT ATCTCCGGGG CGCGCAGCCG
CTCTCCGAGG TGATCCGCCA CGAGGTGGCC CCCGGCATCG ACCTCCTGCC CTGCGGCAGC
CAGCTCGGCG CGGCCCGCCT TGACCGGCAG AAGATGATGG CGCTGCTGCA GATGGCCCGC
GACGCCGGCC AGATCGTGAT CCTCGACACG CCGCCCGCGC TCGCCACCGT CGATACGGCG
AGCCTTGCCG ATCTGGTCGA GACGGCGCTC CTCGTCGTCG AATGGGGCCG GACGGATCCC
GATGCGGTCG AGGCGGCGGT CCAGCGGCTG ACGCTCGGGC GCGAGGGCGA TGTCTTCGCG
GTCATCAACC GGGTGAACCT GCAACGGCAG GCCCTCTATG GCTTCCGCGA CGGCGGGCCC
CTCGCCCGGA CCCTGAGCAG CTTCCACCGC GGCGCAGGCC GCGCGCGCTG A
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| Protein sequence | MSQAQKVALA LRSQPTPIPL PVPAPAQEEW LDVQALFRII RRRLPVAALV FVGLMALLTG
PILDMKRSFT AQARVLMRDP PSAGLGAVDG AEQKPLNLST EIERFVSRDI SAEVIREVGL
DKLPEFNAAL REPSLSRQAI NAVRSWFDAD PPVRATRRDD LRLVIPAYMA RLTVFQKGNS
DVVNIGFSSE DASIAAAVPN AVIRTYLKAR ERQHQGELEA NLRWLAVRIE EQSQRLNAAL
EAVATRRNQP DLSSPSALGI DTAIASLSER RIAIRHDIGA AERSLEDLKA DGVVVGQSGD
SGPEAKPQLG IQLEAARAEL ERLQTQFGEN HSKVRDVRER IAEIESQMRF EVSSEILALT
RRISSLKAEE AANLEELERA RDTLARQKEA QAELARLENE ASQEQLALAA ALQQQRLLLS
SSRQNVTEVS VLTPASVPLN ADGRGKAFYL VAAMIGSAIA AVTAVFALEI LDTKVRSAEH
LRRIRRVVPT GIVPQLPRSR GAPTGPLGWW QPEGVFADAV RAVVISLSHA RRQHLGNILV
SSALPGEGKT TVAAALAAEM AASGQKVLLV DADLRQGNMH RLFGLEPGFG LSDYLRGAQP
LSEVIRHEVA PGIDLLPCGS QLGAARLDRQ KMMALLQMAR DAGQIVILDT PPALATVDTA
SLADLVETAL LVVEWGRTDP DAVEAAVQRL TLGREGDVFA VINRVNLQRQ ALYGFRDGGP
LARTLSSFHR GAGRAR
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