| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3680 |
|---|
| Symbol | |
|---|
| ID | 4898486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 784478 |
|---|
| End bp | 785893 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640114288 |
|---|
| Product | undecaprenyl-phosphate galactose phosphotransferase |
|---|
| Protein accession | YP_001045542 |
|---|
| Protein GI | 126464429 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.210382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.29203 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA ATCTTTCGCC ACTCGGCCCC GCCCCTGCGG GTGGCGCGCT GGGCGATCTG
TCCGGCTTCG AGCCGGTGCC GCAGGGACTG GCGGCGGGAC GCTCTGACGC ACTGGCGCGC
CGCAAGCTCG TCTCGGGGTT CACGCTCCTG CTCTTCGACG GGGCGCCGCT GGCCGCGGTG
GCACAGGGCC TGAGCTGGGC CGGGCCGCCC TTCGCGCCCG ATGCGGCCTT TGCGCCGCTG
CTCCTGCAGG CCGTGCTGGT TCAGATCGTC CTCAAGGCGC TCGGCGGGCT CTATCCCGGC
TACGGTCTGC ATCCCGATGC GGCGCTGCGC CGGTCGATGC AGGCCTGGGG CGGCGGGGCG
CTCGTCGCCG TCTCGAGCGG CTGGCTTCTG ATGCAGGCGA GCGCCGGCAC GCTGGCCGAG
GTGCTGGCGG CCTTCCTGCT CGTCCAGCTC ATGCAGCTCT GCACCGGGCG GCTCGGCCGG
GCGCTCCTCG AGCGGCTGGG CCTCTGGGGC CTGCCCGTGC GGGTGACCGG ATGCCCCGAG
CGCGCCGCGG CGCTCGAGCG GTTCCTCGGC GAGAATCGCC GCTACGGGCT CCTGCCGGTG
CGGCGCGCCG ACGAGGCGCA GGTGGTGCTC TGGGCCGACG ATGCCCTGCC GCCGCCGGAG
AGCCTCGCCC AGCTGCGCCA CCGCCATGCC GAGGTGATGC TCGTGTCCGA CCTGCCGAAG
CTGCAGCTCT CGGGGTTGCA GCCCGCGGAT CACGGCGGCT CGCTCGGCCT GAGGCTGTGC
CGGCCCGCGG ACGGCCCGTC GGTCCGCCTG CTCAAGCGGG CTCTCGATCT GGCGCTGGCC
CTTCCGGCCG CGGTGGTGGT CCTACCGGTC GTGCTGGCCG CGGCCCTCGC GATCCGTTTC
ATCGATCCGG GCCCGGCCTT CTACATCCAG CCGCGCGAGG GGCGGGACGG GCGCAAGATC
CCGATGCTGA AGCTGCGCAC GATGTATCGC GAATCCGAGC GGATGCTGCA GGATCTGCTC
GAACGCGATC CGGCGGCGCG TGCGGAATGG CAGACCAACT TCAAGCTGCG CAAGGATCCC
CGGATCCTGC CGTTCGTCGG CCGCTTCCTG CGGGTGTCGA GCCTCGACGA GCTGCCGCAG
CTGTTCAACA TCATCCGGGG CGAGATGAGC GTGGTCGGGC CGCGGCCCTT CCCCGAGTAT
CATCTGGCGG CGATGCGCCC CGAGTTCCGG CTGCGGCGCG CCTCGGTGGT GCCGGGCCTG
ACCGGACTGT GGCAGATCTC CGAGCGCAGC GAGGCCGATG TCGCGCTGCA GGAGCAGATC
GACGGATACT ATCTCGACAA TCGGTCCTTC TGGTTCGACC TGTCGATCAT TTTCAGCACG
TTCAGAGCCG TCTTCCGGGG GCGGGGCGCC TATTGA
|
|---|
| Protein sequence | MNANLSPLGP APAGGALGDL SGFEPVPQGL AAGRSDALAR RKLVSGFTLL LFDGAPLAAV
AQGLSWAGPP FAPDAAFAPL LLQAVLVQIV LKALGGLYPG YGLHPDAALR RSMQAWGGGA
LVAVSSGWLL MQASAGTLAE VLAAFLLVQL MQLCTGRLGR ALLERLGLWG LPVRVTGCPE
RAAALERFLG ENRRYGLLPV RRADEAQVVL WADDALPPPE SLAQLRHRHA EVMLVSDLPK
LQLSGLQPAD HGGSLGLRLC RPADGPSVRL LKRALDLALA LPAAVVVLPV VLAAALAIRF
IDPGPAFYIQ PREGRDGRKI PMLKLRTMYR ESERMLQDLL ERDPAARAEW QTNFKLRKDP
RILPFVGRFL RVSSLDELPQ LFNIIRGEMS VVGPRPFPEY HLAAMRPEFR LRRASVVPGL
TGLWQISERS EADVALQEQI DGYYLDNRSF WFDLSIIFST FRAVFRGRGA Y
|
|---|
| |