| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3678 |
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| Symbol | |
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| ID | 4898484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 778009 |
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| End bp | 782178 |
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| Gene Length | 4170 bp |
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| Protein Length | 1389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114286 |
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| Product | cadherin |
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| Protein accession | YP_001045540 |
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| Protein GI | 126464427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.210841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA ATGCGATCGT CGTCGAGAAC GCCCGGACCG ACGGGGTGAT GCCGAAGTCC
TACTGGGATG TCGAGCATTC GACCTTCATC GAAGGGTTCG CCACCGACAT CAGCGTCAAT
GCCGGCCAGC GGATCGACTT CAAGATCAAC GTCAACGACG AGGCGGGAAG CGATTACAAG
GTCGAGGTCT TCCGGCTGGG CTATTACGGC GGAGACGGCG CGCGGAAGGT GGCGGAATGG
GTCAATACCG ACGCCAAGGT GCAGGATCAG GCGACCTACA ATCCGGCGCT GGGGCTCGTG
GATGCGGGCA ACTGGTCGGT GACGGACAGC TGGCTCACGC CGACCGACGC GGTGTCAGGG
GTCTATATCG CGCGCGTCCA GAGGCTCGAT GCCGCGGGCA ACCCGATCGA GGGCGAGGTC
AACCAGATCC CCTTCATCCT GCGCGAGGAT GACCGGGCTT CGGACATCGT GCTCCAGACC
TCGGACACGA CCTGGCAGGC CTACAACGGC TGGGGCGGCA ACAACGGCCA GATCGGCGCC
AACCTCTATG GCGACGTCAG CGGCACGATC GACCACCCGG ACATCCCCGG CGCCAGTTCC
TACGAGCCGG ACCGGGCCTA TGCGGTCAGC TACAACCGCC CGCTCATCAC GCGCGGGATC
GACGGCGAGC AGGGCGGCGT CGCGGCCGGG GCGCAGGACT ATCTGTTCGG TGCCGATTAT
GCGGCGATCT ACTGGCTGGA GAAGAACGGC TACGACGTCT CCTACATGTC GGGCGTGGAT
ACCGACCGGC TCGGCGCCGA CTATCTGAAG AAATATCAGG CCTTCATCTC GGTCGGGCAC
GACGAATACT GGTCTGGCGG CCAGAGGTCG AATGTCGAGG AGGCCCGCGA CGACGGCGTC
AACCTGCTCT TCTGGGGCGG CAACGACGTC TACTGGAAGA CGCGCTACGA GGCGAGCGCG
GTCGACGGCG TCGATTACCG CACCCTCGTC TGCTACAAGG AGACGACGGC GGTCGCCGAC
CCGAACGCGG GACCGGAAGA CTACTACAAC CTCGATCCGA CCGACATCTG GACCGGCACC
TGGCGCGACA CCCGCTTCCA CGGCAACCCT CTGGCGGGGG GCGGCCTGCC CGACGATTTC
CTCTCGGGCC AGTGCCCGAC CTGCAACTGC GCCGAGAACT CGCTCACCGG CCAGCTGTTC
GGGCCCGACG GCACCGGCGA ATTCGGCGGC GCGCTGGATG TGACCGGCGA ATATGCGCAG
CTCCGGGTCT GGCGCGACAC CACCATCGCG AACGGCGGCG CGCTCGACAT CGCTCCGGGT
CTGCTCGGCT ACGAGTGGAA CACCTCGCCC GACGACTACA ACCGGCCGGC CGGCCTCGTG
CATCTGTCCG AGACGACCAT TCCCTGGGGC GCGATCCTGA CCGATCAGGG CAACACCACC
GCGCCGGGCA TCGCCACGCA CAATCTGTCT CTCTACCGCG CCGAGAGCGG CGCGCTCGTC
TTCGGGGCCG GCACGGTGTT CTGGACCTGG GCGCTCAGCA ACCTGCACGA CGGCGAGCCC
TACAATGCGC AGATCGAGAA CCGCGACCTG CAGCAGTTCG TGATGAACAT GTTCGCCGAC
ATGGGCATCC AGCCCGGTGT GGCCGATGCG GTGCTGGCCT CGCAGGGGCT GCTGCGCGCG
CTGGCCTCGG CGGACCATGC GCCCGCCACG GCGCTCATCA ACGACCTGCC CGACACGCTG
CCCGCGCTCG AGACCGTCAC GATCACCGGC ACCGCCACCG ACGACGACGG CAATCCCTTG
ACCGAGGACG GACGGGTGGC GCTGGTCGAG GTGTCCCTCG ACGGCGGCAC GACCTGGACG
GCGGCACAGG GCACGACGAA CTGGAGCTTC AGCTGGACGC CGACCCGTCA GGGGATCTTC
GACATCCGGG TGCGAGCCTT CGACGACTCC CTGAACCTGC CGGTGGCCGT GACGCTCGAC
CGCGAGACGG TCGAGATCAC CGCACCCGTG GTGCCCCCCG AGGTGAGCCT CTTCGACCCG
TTCGTGACCT TCAACGGCGA GTCGCACAAT GACAACACGG CGCTCGAACT CGGGACGCGC
TTCACGGCGC TGCAGACGGG CTCCGTCACC GAACTGCGCT ACTATCGCGC GGCCTCGGAT
GCGACCGACA CGGATACGCG GACGGGGCAT CTGTGGCGCG CGGACGGCAC GCTGCTGGCG
ACCGTGACCT TCGTCTCGAC GCCGGGTCAG ACGGGCTGGC AGACGGCGGA GCTGTCGTCG
CCGATCACGC TGGCGGCGGG GCAGAGCTAT GTCGTCTCCT ACACGACGCA GGACAATTAC
GTCGGCACGA ACGGCTTCTT CTCGACCGGC TACGTCGATC CCTACGGCAT CCTGAGCGCC
GGGGCGGGCA CCGGCGGCGT GTTCGCGGTG GGCTCGAACA TCTTCCCCCA ATCGAGCTAT
CAGGGGACGA GCTACTGGGT GGACATCACC TTTGCCCCGC AGGCGGTGGG AACCGGCCTG
CCGGTCTTCG CCGGGCCCTC GAGTCTCTCG GTGGCCGAGA ACGACCTTTA TGTGGGCACG
GTCGCCGCCA CCGACCCGCA GGGCCAGCCG ATCAGCTACG CCATCACCGG CGGGGCGGAT
GCCGGTCTCT TCAGCATCGA CGCGAAGACG GGCGCGCTGC ATTTCCGCTT CCCCGCCAAC
CATGAGCTGC CCACCGACGC GGACGGCAAC AACATCTTCC AGTTCCGCGT GACGGCCACG
GATCTGACCG GCGAGGCCGC CACGCGCGAC TTTTCGGTGA CCCTCACCGA TGTGGTCGAC
GAGTCCCTCC ATCCGTCGCT TCTCTTCGGC CCGGCGGATG CTCCCGCCGC CTCGATCACC
GACGATCCCA CCGACTATGA GCTCGGGATG CGGTTCCAGG CCGCGAGCAG CGGCGAGATC
ACCAGCCTGC GCTACTTCCG GGGCGCGGCC GATGCGGGCG ACGTGGACAC GCGCACCCTG
CATCTGTGGA GCGCGACGGG CGTGCTGCTC GCCTCGGTCG AGGTGACCTC GGGCGCGGGC
CAGTCCGGGT GGCAGACCGG CACGCTCTCC GCGCCGATCC AGATCGAGGC GGGCCAGACC
TATGTCGTCT CCTACGGCAC GGTGCAGAAC TATGTCGCGA CGCAGAATTA CTTCACCTCC
GACCATGTCG GCGCCGATGG CGCCCTGACC GGCCTCGGCG GCACCGGCAA CGGGGTCTAT
CATGCCGGCG GCACCGGGAT CTTCCCGACC TCGAGCTATC TGAGCACGAA CTACTGGGTC
GATGTGGTCT TCGAGCCGGG CAGCAACGGC ACGACCAACA GCGCGCCCAC CTTCACCAGC
GCCGCCACCG TCCCGGCCGC CGAGAACCAG ACCGTCGCGA TCGATCTTTC GGCGGTGGAT
GCCGATGGCG ACAGCTTCGT CTTCGCCATC GCCGGGGGGG CGGATGCCTC GAAATTCGCG
ATCGATCCGA ACACGGGCCT CCTCACCTTC CTGACCGCCC CCGACTACGA GGCGCCGACG
GATGCCGATG GCAACAATGC CTATCAGGTG ACGGTCTCGG TATCCGACGG GATGAGCCCG
CCCACGACGC AGGCTCTGAC CGTGAACGTG ACCGACGTGG TCGAGCCGGG CGGCACGGCC
TGGAACCTGT TCGGGGCGGC CGCGGGGCCC GACCAGATCG TGACCTCCGA CAGCGAAGAC
TACGAACTCG GAGCGAAGTT CGTCTCGAAC GGCGCGGGCC TCGTCACCAG CCTTCGCTAC
TTCCGGGGCG CGGCCGATGC GCAGGACACC GATGTGCGCA CGCTCAACCT CTGGAGCGCG
ACCGGCACCA AGCTCGCCAC GGTCACGGTG ACATCGGCCC CCGGCCAGAC CGGCTGGCAG
ACGGCAGAGC TCGACACGCC CTTCCAGATC CAGGCGGGCC AGACCTATGT GATCTCTTAT
GGCACGACGC AGAACTACGC CTACAGCGGC GGCTTCTTCG ACACCGACTG GGTCGGGCCC
GGCGGCCATC TGACCGCGCC CGGCGGCGCC GTGGCGAACG GCGTCTTCCA CGCGGGCAGC
ACCGGGCTCT TCCCGGATCA GAGCTTCAAC GATGCGAACT ACTGGGTGGA TCTGACGGTC
ACGCCGCTCG ACCCCGGGCT GCTCGTCTGA
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| Protein sequence | MTDNAIVVEN ARTDGVMPKS YWDVEHSTFI EGFATDISVN AGQRIDFKIN VNDEAGSDYK
VEVFRLGYYG GDGARKVAEW VNTDAKVQDQ ATYNPALGLV DAGNWSVTDS WLTPTDAVSG
VYIARVQRLD AAGNPIEGEV NQIPFILRED DRASDIVLQT SDTTWQAYNG WGGNNGQIGA
NLYGDVSGTI DHPDIPGASS YEPDRAYAVS YNRPLITRGI DGEQGGVAAG AQDYLFGADY
AAIYWLEKNG YDVSYMSGVD TDRLGADYLK KYQAFISVGH DEYWSGGQRS NVEEARDDGV
NLLFWGGNDV YWKTRYEASA VDGVDYRTLV CYKETTAVAD PNAGPEDYYN LDPTDIWTGT
WRDTRFHGNP LAGGGLPDDF LSGQCPTCNC AENSLTGQLF GPDGTGEFGG ALDVTGEYAQ
LRVWRDTTIA NGGALDIAPG LLGYEWNTSP DDYNRPAGLV HLSETTIPWG AILTDQGNTT
APGIATHNLS LYRAESGALV FGAGTVFWTW ALSNLHDGEP YNAQIENRDL QQFVMNMFAD
MGIQPGVADA VLASQGLLRA LASADHAPAT ALINDLPDTL PALETVTITG TATDDDGNPL
TEDGRVALVE VSLDGGTTWT AAQGTTNWSF SWTPTRQGIF DIRVRAFDDS LNLPVAVTLD
RETVEITAPV VPPEVSLFDP FVTFNGESHN DNTALELGTR FTALQTGSVT ELRYYRAASD
ATDTDTRTGH LWRADGTLLA TVTFVSTPGQ TGWQTAELSS PITLAAGQSY VVSYTTQDNY
VGTNGFFSTG YVDPYGILSA GAGTGGVFAV GSNIFPQSSY QGTSYWVDIT FAPQAVGTGL
PVFAGPSSLS VAENDLYVGT VAATDPQGQP ISYAITGGAD AGLFSIDAKT GALHFRFPAN
HELPTDADGN NIFQFRVTAT DLTGEAATRD FSVTLTDVVD ESLHPSLLFG PADAPAASIT
DDPTDYELGM RFQAASSGEI TSLRYFRGAA DAGDVDTRTL HLWSATGVLL ASVEVTSGAG
QSGWQTGTLS APIQIEAGQT YVVSYGTVQN YVATQNYFTS DHVGADGALT GLGGTGNGVY
HAGGTGIFPT SSYLSTNYWV DVVFEPGSNG TTNSAPTFTS AATVPAAENQ TVAIDLSAVD
ADGDSFVFAI AGGADASKFA IDPNTGLLTF LTAPDYEAPT DADGNNAYQV TVSVSDGMSP
PTTQALTVNV TDVVEPGGTA WNLFGAAAGP DQIVTSDSED YELGAKFVSN GAGLVTSLRY
FRGAADAQDT DVRTLNLWSA TGTKLATVTV TSAPGQTGWQ TAELDTPFQI QAGQTYVISY
GTTQNYAYSG GFFDTDWVGP GGHLTAPGGA VANGVFHAGS TGLFPDQSFN DANYWVDLTV
TPLDPGLLV
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