| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3645 |
|---|
| Symbol | |
|---|
| ID | 4898757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 744256 |
|---|
| End bp | 745269 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114253 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_001045507 |
|---|
| Protein GI | 126464394 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.650504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.152004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA ACCGTCGCCG TTTCGTCGCG ACCGCAGGTG GCGTGCTGCT CGCCGCCCCC
TTCCTTCGGC CGGGCATGGC CCATGCCGCC GAATATTCCT ACAAGTACGC CAACAACTTC
CCCGTCGGCC ATCCGATGAA CACCCAGATG GAGGCCGCGG CGAAGCGGAT CTCCGAAGAG
ACCGACGGCC GGTTCGAGCT GAAGATCTTC CCGAACAACC AGCTCGGCTC CGACACGGAC
ACGCTGAATC AGGTGCGGTC GGGCGCGGTC GAGTTCTTCA CGCTGTCGGG ACTGATCCTG
TCGTCGCTGG TGCCGGTCGC TTCGATCAAC GGCATGGGCT TTGCTTTCAA GGACATCGAC
CAAGTCTGGC AGGCGATGGA CGGCGAGCTC GGCGCCTATG TGCGCGAGCA GATCCGCGCC
AACCGCCTCG AGGTGATGGA CCGGATCTTC AACAACGGCT TCCGCCAGAT CACAACCTCC
AGCCGCCCGA TCGAGGGGCC GGACGATCTC GCCGGGCTGA AGATCCGCGT GCCGGTCAGC
CCGCTCTGGA CCTCGATGTT CCAGGCGCTC GGCTGCGCCC CGGTCAGCAT CAACTGGAAC
GAGGTCTATA CCTCGCTGCA GACCGGCGTC GTGGATGCGC AGGAGAACCC GCTGTCGACC
ATCGACGTGG GCAAGCTCTA CGAAGTGCAG ACCTACTGCT CGATGACGAA CCACATGTGG
GACGGCTTCT GGATGCTCGC CAACCCGCGG GCCTGGCGGG CGCTGCCCGA CGACCTGCAG
GAGATCGTGG CCCGCAACAT CAACCAGGCC GCGCTCGACC AGCGCGAGGA TCTGACCCAG
CTCAACGCGA CGCTCCAGAG CGAGCTGGAA AAGGACGGGC TGATCTTCAA CAAGCCCGAC
ACCGCCGCCA TCCGCGACAA GCTGCGTGAG GCGGGCTTCT ACAGCGAATG GCGCAGCACC
TACGGCGACG AGGCCTGGGC GCTCCTCGAG CAGGTCTCGG GCTCGCTGGC CTGA
|
|---|
| Protein sequence | MTINRRRFVA TAGGVLLAAP FLRPGMAHAA EYSYKYANNF PVGHPMNTQM EAAAKRISEE
TDGRFELKIF PNNQLGSDTD TLNQVRSGAV EFFTLSGLIL SSLVPVASIN GMGFAFKDID
QVWQAMDGEL GAYVREQIRA NRLEVMDRIF NNGFRQITTS SRPIEGPDDL AGLKIRVPVS
PLWTSMFQAL GCAPVSINWN EVYTSLQTGV VDAQENPLST IDVGKLYEVQ TYCSMTNHMW
DGFWMLANPR AWRALPDDLQ EIVARNINQA ALDQREDLTQ LNATLQSELE KDGLIFNKPD
TAAIRDKLRE AGFYSEWRST YGDEAWALLE QVSGSLA
|
|---|
| |