| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3636 |
|---|
| Symbol | |
|---|
| ID | 4898644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 734649 |
|---|
| End bp | 735680 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640114244 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001045498 |
|---|
| Protein GI | 126464385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.93135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.343272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACTC GACGCCATCT GATGGCGAGC ATCGGCGCAT CCGCCCTCAT GCTGCCGCTC
GCGCGCCGCG CCATGGCGCA GCAGCCCTTC GTGATCCCGA CCTATGGCGG GACATGGGCG
AAGCTCTGGG AAGAGACGCT GGTGCCCGAA TTCACCTCGG CCACGGGCAT CCAGAGCCAG
ATCGACGTGG GGCTCGGCAA GGATTTCGTC TCGAAGATCC GCGCCGGCGG CGGGGCTTCG
CCCTATTCGG TCTTCATGGG CAACGAGAAC ATCGCGGCCA CCCTGCGCGC CGAAGGCTTC
TTCGAGCCGC TCGACATGTC GAAGGTCCCG AACGCCGCCA ACATGTATGA CGGCCTCATC
AACCCGGGCA ACAACGGGCT GCGCGCGATC GTCTCGCCCA TCGGTCTCGC CTGGCGGACC
GACATGATCC AGACGCCGCC CAAGGCCTGG ACCGACCTGT GGGAGAACCC GGAATATGCC
GGGCAGATCG GCCTCTACCA GATCGGCAAC ACCGGGGCAC AGCTCTTCCT GCGGCTCGCA
GGGCGGCTCT TCGGCTCGGG CGATACCGAC ATCGACACCG CCTTCACGAA GATCAAGGAG
CTGCAGCCCT TCACCCAGGC CTCCTGGAGC GGCGAGGTTG CGGCCCAGCT CATGCGCGGC
GACGTGGCGA TTGCCCCGGT GGACTGGACC GAGATCCTGA CGCTGCAGGA CAAGGGCGCC
CCGGTCGAGA TCATCGTGCC CGAGGAAGGG GTGCTGTCCT ACGAGCAGAG CTTCAACATC
GTGAAGACCG GGCCCGACAA GGAAGCGGCG CACGCCTATA TCAACTTCCT CCTCGACCCG
AAGATCCAGT CGATCCTCGC GGACACGTTC TACGTCTCGC CGGCCAACCG CGAGGCCGTC
ATCAGCGAGG CAACCTCGCC GCGCCTGCCG GTGCAGGGCG AGGCCATGTC GAAGATCATC
CGCTTCGAGT GGGACAATTA CATCGACATC GCAGCCGAGG TCGCCGACCG CTGGAACCGC
GAAATCGGCT GA
|
|---|
| Protein sequence | MITRRHLMAS IGASALMLPL ARRAMAQQPF VIPTYGGTWA KLWEETLVPE FTSATGIQSQ
IDVGLGKDFV SKIRAGGGAS PYSVFMGNEN IAATLRAEGF FEPLDMSKVP NAANMYDGLI
NPGNNGLRAI VSPIGLAWRT DMIQTPPKAW TDLWENPEYA GQIGLYQIGN TGAQLFLRLA
GRLFGSGDTD IDTAFTKIKE LQPFTQASWS GEVAAQLMRG DVAIAPVDWT EILTLQDKGA
PVEIIVPEEG VLSYEQSFNI VKTGPDKEAA HAYINFLLDP KIQSILADTF YVSPANREAV
ISEATSPRLP VQGEAMSKII RFEWDNYIDI AAEVADRWNR EIG
|
|---|
| |