Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3619 |
Symbol | |
ID | 4898663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 711637 |
End bp | 712233 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640114227 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001045481 |
Protein GI | 126464368 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.479611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC CCCAAGACCA GACCGGACAC CATGTCCAGG AGCTGCCCGT CGAGACCCCG CTCGGCGTCC CGCAGGAGGC GGGCACCGTG GGCCGGCTCG TCGAGCGCCT CGGCTTCCTC TTCGCGGCCG GCATCGTGAT CGCCGCGCTG ATGCTGCTGA TGGAGGTGTT CCTGCGCTAT GTCCTCAACC GCCCGACGAT CTGGGCGCAC GAGGCCTCGA CCTTCCTCTG CGCGCTCGCC TTCCTTTTCG GCGGGCTCTA TTGCGCCTCC CGCGACAGCC ACATCCGGGT GGTGCTGCTC TATGACCTGA TGCCCGCCCC GGCGCGCCGC TGGCTCGATG TCTTCATCTC GACCGCCAGC ATGGTCGCCT CGGGCTTCTT CGCCTGGGCC GCCTGGCTGA TGGTGGCCAA GTCGGTCTGG GCGCCCTCGG GCGAGGTCCG GCTGGAACGC TCGGGTAGCG CCTGGAACCC GGCGATCCCG GCCTGGACCA AGATCTTCCT CTTCGTGGTC ATGATCGTGA TGACCGTGCA ATTCGCCGTC TTCGCCTGGA ACCAGCTCCG CCGGTCCGGC ACCCACCGCA CCGGGGACAA GTCATGA
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Protein sequence | MTDPQDQTGH HVQELPVETP LGVPQEAGTV GRLVERLGFL FAAGIVIAAL MLLMEVFLRY VLNRPTIWAH EASTFLCALA FLFGGLYCAS RDSHIRVVLL YDLMPAPARR WLDVFISTAS MVASGFFAWA AWLMVAKSVW APSGEVRLER SGSAWNPAIP AWTKIFLFVV MIVMTVQFAV FAWNQLRRSG THRTGDKS
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