Gene Rsph17029_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3619 
Symbol 
ID4898663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp711637 
End bp712233 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID640114227 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001045481 
Protein GI126464368 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.479611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC CCCAAGACCA GACCGGACAC CATGTCCAGG AGCTGCCCGT CGAGACCCCG 
CTCGGCGTCC CGCAGGAGGC GGGCACCGTG GGCCGGCTCG TCGAGCGCCT CGGCTTCCTC
TTCGCGGCCG GCATCGTGAT CGCCGCGCTG ATGCTGCTGA TGGAGGTGTT CCTGCGCTAT
GTCCTCAACC GCCCGACGAT CTGGGCGCAC GAGGCCTCGA CCTTCCTCTG CGCGCTCGCC
TTCCTTTTCG GCGGGCTCTA TTGCGCCTCC CGCGACAGCC ACATCCGGGT GGTGCTGCTC
TATGACCTGA TGCCCGCCCC GGCGCGCCGC TGGCTCGATG TCTTCATCTC GACCGCCAGC
ATGGTCGCCT CGGGCTTCTT CGCCTGGGCC GCCTGGCTGA TGGTGGCCAA GTCGGTCTGG
GCGCCCTCGG GCGAGGTCCG GCTGGAACGC TCGGGTAGCG CCTGGAACCC GGCGATCCCG
GCCTGGACCA AGATCTTCCT CTTCGTGGTC ATGATCGTGA TGACCGTGCA ATTCGCCGTC
TTCGCCTGGA ACCAGCTCCG CCGGTCCGGC ACCCACCGCA CCGGGGACAA GTCATGA
 
Protein sequence
MTDPQDQTGH HVQELPVETP LGVPQEAGTV GRLVERLGFL FAAGIVIAAL MLLMEVFLRY 
VLNRPTIWAH EASTFLCALA FLFGGLYCAS RDSHIRVVLL YDLMPAPARR WLDVFISTAS
MVASGFFAWA AWLMVAKSVW APSGEVRLER SGSAWNPAIP AWTKIFLFVV MIVMTVQFAV
FAWNQLRRSG THRTGDKS