Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3616 |
Symbol | |
ID | 4898188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 707605 |
End bp | 708363 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640114224 |
Product | GntR domain-containing protein |
Protein accession | YP_001045478 |
Protein GI | 126464365 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.760095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGT CGAAGACGAA CCCGGAGATG ACGTTGACCG AGGGGGCCGG ACGGCAGGGA CGGCGCGTGA TGTCGACCTG CCTGCGCGAC TTCGTCAGCG CCATCGTCTC GGGGGAGCTG GCCGAGGGCA AGACCCTGCC GAGCGAGGCC GACCTGATGG CGCGCTTCGG CGTGAGCCGC ACCACCCTGC GCGAGACGAT GCAGCATATG GTGGCTCAGG GCCTCATCCG CTCGCGTCCC CGCGCGGGCA CCATGGTGCT GCCGCGCAGC CAGTGGAACA TGCTGGATCC GGTCGTCCTC GACGCGGCCC TCGCCCAGCC GAACGATTTC GCCTTCTACG ATGCGCTGAT GCAGGCGCGC GAGGTGCTGG AACCGGCCGC CGCCGCCGCC GCCGCGGCCA GCGCCGACAA TGAGGCGCTG GTCGAGATCA CCCGCGCCTT CGAGGCGATG CGCAAGTCGG ACGGCCGCGA CGACGAGGCC TGGAGCATCG CCGATCTCGC CTTCCACACC GCGCTGAACC GCGCCAGCGG CAACTGGGTC TTCGCGCAGT TCGGGATCGC GATCCGGGCG GCGCTGCTCG CGAGCTTCCG CAAGACCAAC CGGGCGAGCC AGTCCTTCCA CGAGGCGATC GGGATGCACG AAAAGGTGCT CGAGGCGATC CGGATGCGCC AGCCCGAGAC CGCCCGAACC GCGATGCAGA CCCTGCTGCG GCACGCGCGT CGCGACATGG AAGCGATGTA TTCCAACCGC GGAACCTGA
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Protein sequence | MDESKTNPEM TLTEGAGRQG RRVMSTCLRD FVSAIVSGEL AEGKTLPSEA DLMARFGVSR TTLRETMQHM VAQGLIRSRP RAGTMVLPRS QWNMLDPVVL DAALAQPNDF AFYDALMQAR EVLEPAAAAA AAASADNEAL VEITRAFEAM RKSDGRDDEA WSIADLAFHT ALNRASGNWV FAQFGIAIRA ALLASFRKTN RASQSFHEAI GMHEKVLEAI RMRQPETART AMQTLLRHAR RDMEAMYSNR GT
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