Gene Rsph17029_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3603 
Symbol 
ID4898450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp695097 
End bp695618 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID640114211 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001045465 
Protein GI126464352 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.324027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC GTGACGATCC TCATGGGGTC TTCGGCGCCT TGATGAGCGG CTACGATCGG 
TTGTCGCGCC ATCTGACGCG CCGACCGGGG ACCCTGTGCG ATGCTCAGGA TGTGATGCAG
GACGCCTGGC TCAGGCTCGC GAAGGTGCAG GATGTCGAGG AGATGTCGAG CCCGGCCGCC
TATGTCGGGC AGGTGGTGAG AAATCTGGCA ATCGACCGGC TTCGCGCGCA GAGGGTTCGA
GAGAGGCACT TCTCGGCAGC GGAGGTCCAC GATCAGCCTG CCGACCTCCC GTCGGCAGAA
CGTATCGTCG ACTTTCGTCA GCGCCTGGCG CGTCTGGAAG AGATCGTCGC CGAATTGCCG
CCCCGGCAGC GACAGGTTTT CCTCTTGCAC AAGTTCGACG GGTTGAGCCA TTCCGAGATC
GCCGCGCGTC TGGGGATCAG CCGGAGCGCG GTCGAAAAGC TGATCATGAA GGCGCTCGCA
CAGTGCCGTG ACGGTCTGGG CGACCTGCTC GATGATCTGT GA
 
Protein sequence
MAERDDPHGV FGALMSGYDR LSRHLTRRPG TLCDAQDVMQ DAWLRLAKVQ DVEEMSSPAA 
YVGQVVRNLA IDRLRAQRVR ERHFSAAEVH DQPADLPSAE RIVDFRQRLA RLEEIVAELP
PRQRQVFLLH KFDGLSHSEI AARLGISRSA VEKLIMKALA QCRDGLGDLL DDL