Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3589 |
Symbol | |
ID | 4898858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 682170 |
End bp | 682826 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640114198 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001045452 |
Protein GI | 126464339 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.144586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA CTTCCACCGT GCGGCGCAAT CCGCTGGATC ATCTGATGGA TCTCATCGAG GCGGGCGATC TGCCTCCGGG CAGCCGCCTG ACCGAGACCG ATCTGGCGCA GCGGCTCGGC ATCAGCCGGA CCCCGGTGCG CGAGGCGCTG CACCGTCTTC ATGCGATGGG GCTGGCCGAG CACGGGCCGC AGCGGGGGCT CATCATCGCC CATCTGAGCT ACGACCAGCT CCGTCAGCTC TTCGCCGTGC GCGAGGGGCT GGAGGGAATG GCGACGCGGC TCGCGGCGGA ACATGCCTCG CGCGCCGAGG CGAACCTCCT GCGGGAGATG GTGACGGCGG ATCGCGCGCT CGACGATCCG GCCAAGCTGC GCGAGCGCAA CAAGATCCTG CATCGGCAGA TCGTGCAGGC CTCGCACAAC AAGTTCATGA TCGAGGCGCT CGGCAATCTG CGGGTTCATC TGAGCCTCCT GCCCGGCTCC ACCTACACGT CTGCGGGCCG GGTCGCCGAG GCGCAGGCCG AGCATGAGGA GATCGTGGAG GCGATCGCGG CGGGCGACGG GGATCGGGCC GAGAAGGCCG CGCGCCACCA CATCGCGTCG GGATTTCGGA TCCGGCTGAA GATGATGTCG GAGCAGGAGG CGACGCATCT GAAATAA
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Protein sequence | MSETSTVRRN PLDHLMDLIE AGDLPPGSRL TETDLAQRLG ISRTPVREAL HRLHAMGLAE HGPQRGLIIA HLSYDQLRQL FAVREGLEGM ATRLAAEHAS RAEANLLREM VTADRALDDP AKLRERNKIL HRQIVQASHN KFMIEALGNL RVHLSLLPGS TYTSAGRVAE AQAEHEEIVE AIAAGDGDRA EKAARHHIAS GFRIRLKMMS EQEATHLK
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